RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C YRF1-6P53819 1859 aa4.3□□□□□ -1.72
TRM1YDR120C ARP1P38696 384 aa4.29□□□□□ -1.72
TRM1YDR120C TOM71P38825 639 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C PSA1P41940 361 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C FAR3P46671 204 aa4.29□□□□□ -1.72
TRM1YDR120C BNA3P47039 444 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C LYS20P48570 428 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C YGR066CP53242 292 aa4.29□□□□□ -1.72
TRM1YDR120C ECM22Q05958 814 aaPredicted RBP4.29□□□□□ -1.72
TRM1YDR120C CKA1P15790 372 aa4.29□□□□□ -1.72
TRM1YDR120C EST1P17214 699 aaPredicted RBP4.29□□□□□ -1.72
TRM1YDR120C ANS1P38832 159 aa4.29□□□□□ -1.72
TRM1YDR120C UTP9P38882 575 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C YEL057CP39983 233 aa4.29□□□□□ -1.72
TRM1YDR120C SGN1P40561 250 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
TRM1YDR120C APT1P49435 187 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C VID30P53076 958 aa4.29□□□□□ -1.72
TRM1YDR120C YGR127WP53275 312 aa4.29□□□□□ -1.72
TRM1YDR120C YNL144CP53907 740 aa4.29□□□□□ -1.72
TRM1YDR120C UTP21Q06078 939 aaPredicted RBP4.29□□□□□ -1.72
TRM1YDR120C ETT1Q08421 412 aaKnown RBP4.29□□□□□ -1.72
TRM1YDR120C RPS10AQ08745 105 aaPredicted RBP4.29□□□□□ -1.72
TRM1YDR120C DFR1P07807 211 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
TRM1YDR120C MFT1P33441 392 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C TIF3P34167 436 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C YBR144CP34215 104 aa4.28□□□□□ -1.72
TRM1YDR120C RFC1P38630 861 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C DBP8P38719 431 aa4.28□□□□□ -1.72
TRM1YDR120C MET28P40573 187 aa4.28□□□□□ -1.72
TRM1YDR120C RPS10BP46784 105 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C ERG26P53199 349 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C EMI2Q04409 500 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C ADE13Q05911 482 aaKnown RBP4.28□□□□□ -1.72
TRM1YDR120C ATG26Q06321 1198 aa4.28□□□□□ -1.72
TRM1YDR120C GRC3Q07845 632 aa4.28□□□□□ -1.72
TRM1YDR120C TEN1Q07921 160 aa4.28□□□□□ -1.72
TRM1YDR120C SCM3Q12334 223 aa4.28□□□□□ -1.72
TRM1YDR120C MET17P06106 444 aa4.27□□□□□ -1.73
TRM1YDR120C YER190C-BP0CX94 160 aa4.27□□□□□ -1.73
TRM1YDR120C YEL077W-AP0CX95 160 aa4.27□□□□□ -1.73
TRM1YDR120C YGR296C-BP0CX96 160 aa4.27□□□□□ -1.73
TRM1YDR120C YPL283W-BP0CX97 160 aa4.27□□□□□ -1.73
TRM1YDR120C YPR204C-AP0CX98 160 aa4.27□□□□□ -1.73
TRM1YDR120C IMG1P25626 169 aa4.27□□□□□ -1.73
TRM1YDR120C GAC1P28006 793 aa4.27□□□□□ -1.73
TRM1YDR120C YBL055CP34220 418 aaPredicted RBP4.27□□□□□ -1.73
TRM1YDR120C SEF1P34228 1148 aa4.27□□□□□ -1.73
TRM1YDR120C NUP133P36161 1157 aa4.27□□□□□ -1.73
TRM1YDR120C FLO5P38894 1075 aa4.27□□□□□ -1.73
TRM1YDR120C HXT9P40885 567 aa4.27□□□□□ -1.73
TRM1YDR120C MAF1P41910 395 aa4.27□□□□□ -1.73
TRM1YDR120C YPT11P48559 417 aa4.27□□□□□ -1.73
TRM1YDR120C HOS2P53096 452 aaPredicted RBP4.27□□□□□ -1.73
TRM1YDR120C APC1P53886 1748 aa4.27□□□□□ -1.73
TRM1YDR120C RPC11Q04307 110 aaPredicted RBP4.27□□□□□ -1.73
TRM1YDR120C YLR287CQ05881 355 aa4.27□□□□□ -1.73
TRM1YDR120C VPS38Q05919 439 aa4.27□□□□□ -1.73
TRM1YDR120C BUG1Q12191 341 aa4.27□□□□□ -1.73
TRM1YDR120C HSH49Q99181 213 aaPredicted RBP4.27□□□□□ -1.73
TRM1YDR120C ROX1P25042 368 aa4.26□□□□□ -1.73
TRM1YDR120C ECM32P32644 1121 aaKnown RBP4.26□□□□□ -1.73
TRM1YDR120C LEU5P38702 357 aa4.26□□□□□ -1.73
TRM1YDR120C PTR3P43606 678 aa4.26□□□□□ -1.73
TRM1YDR120C VPS25P47142 202 aa4.26□□□□□ -1.73
TRM1YDR120C SGF73P53165 657 aa4.26□□□□□ -1.73
TRM1YDR120C MRP13P12686 339 aa4.26□□□□□ -1.73
TRM1YDR120C BUD5P25300 642 aaPredicted RBP4.26□□□□□ -1.73
TRM1YDR120C BOS1P25385 244 aa4.26□□□□□ -1.73
TRM1YDR120C NPL6P32832 435 aa4.26□□□□□ -1.73
TRM1YDR120C UBP11P36026 717 aa4.26□□□□□ -1.73
TRM1YDR120C TCD2P36101 447 aaKnown RBP4.26□□□□□ -1.73
TRM1YDR120C ALG5P40350 334 aa4.26□□□□□ -1.73
TRM1YDR120C YIL060WP40519 144 aa4.26□□□□□ -1.73
TRM1YDR120C ROK1P45818 564 aaPredicted RBP4.26□□□□□ -1.73
TRM1YDR120C EAF6P47128 113 aa4.26□□□□□ -1.73
TRM1YDR120C RPL15BP54780 204 aaPredicted RBP4.26□□□□□ -1.73
TRM1YDR120C MSC1Q03104 513 aa4.26□□□□□ -1.73
TRM1YDR120C ARP10Q04549 284 aa4.26□□□□□ -1.73
TRM1YDR120C POS5Q06892 414 aa4.26□□□□□ -1.73
TRM1YDR120C AVL9Q12500 764 aa4.26□□□□□ -1.73
TRM1YDR120C PGA3Q12746 312 aaKnown RBP4.26□□□□□ -1.73
TRM1YDR120C YLR419WQ06698 1435 aaKnown RBP4.25□□□□□ -1.73
TRM1YDR120C FOB1O13329 566 aa4.25□□□□□ -1.73
TRM1YDR120C GAL80P04387 435 aa4.25□□□□□ -1.73
TRM1YDR120C ARG81P05085 880 aa4.25□□□□□ -1.73
TRM1YDR120C PUT2P07275 575 aa4.25□□□□□ -1.73
TRM1YDR120C RED1P14291 827 aa4.25□□□□□ -1.73
TRM1YDR120C MDM10P18409 493 aa4.25□□□□□ -1.73
TRM1YDR120C WBP1P33767 430 aaKnown RBP4.25□□□□□ -1.73
TRM1YDR120C YKL100CP34248 587 aa4.25□□□□□ -1.73
TRM1YDR120C ICS2P38284 255 aa4.25□□□□□ -1.73
TRM1YDR120C UBA4P38820 440 aa4.25□□□□□ -1.73
TRM1YDR120C MET18P40469 1032 aa4.25□□□□□ -1.73
TRM1YDR120C IMD4P50094 524 aaKnown RBP4.25□□□□□ -1.73
TRM1YDR120C IPI3P53877 555 aa4.25□□□□□ -1.73
TRM1YDR120C BOP3P53958 396 aa4.25□□□□□ -1.73
TRM1YDR120C RSM23Q01163 450 aa4.25□□□□□ -1.73
TRM1YDR120C SPC19Q03954 165 aa4.25□□□□□ -1.73
TRM1YDR120C SYF1Q04048 859 aaPredicted RBP4.25□□□□□ -1.73
TRM1YDR120C MCP2Q06567 569 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms