RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C SGF29P25554 259 aa4.02□□□□□ -1.77
YDR034C-CYDR034C-C SYN8P31377 255 aa4.02□□□□□ -1.77
YDR034C-CYDR034C-C MTR2P34232 184 aaKnown RBP4.02□□□□□ -1.77
YDR034C-CYDR034C-C MUD2P36084 527 aaKnown RBP4.02□□□□□ -1.77
YDR034C-CYDR034C-C DHH1P39517 506 aaKnown RBP4.02□□□□□ -1.77
YDR034C-CYDR034C-C LCL3P53153 274 aa4.02□□□□□ -1.77
YDR034C-CYDR034C-C SCW10Q04951 389 aa4.02□□□□□ -1.77
YDR034C-CYDR034C-C YDL057WQ07379 328 aa4.02□□□□□ -1.77
YDR034C-CYDR034C-C THI20Q08224 551 aa4.02□□□□□ -1.77
YDR034C-CYDR034C-C KAR3P17119 729 aa4.01□□□□□ -1.77
YDR034C-CYDR034C-C RPS2P25443 254 aaKnown RBP4.01□□□□□ -1.77
YDR034C-CYDR034C-C SAC6P32599 642 aaKnown RBP4.01□□□□□ -1.77
YDR034C-CYDR034C-C PTR2P32901 601 aa4.01□□□□□ -1.77
YDR034C-CYDR034C-C CIN4P39110 191 aa4.01□□□□□ -1.77
YDR034C-CYDR034C-C DUO1P53168 247 aaKnown RBP4.01□□□□□ -1.77
YDR034C-CYDR034C-C SGS1P35187 1447 aa4□□□□□ -1.77
YDR034C-CYDR034C-C CAR1P00812 333 aaKnown RBP4□□□□□ -1.77
YDR034C-CYDR034C-C SEC53P07283 254 aaKnown RBP4□□□□□ -1.77
YDR034C-CYDR034C-C MTF1P14908 341 aaKnown RBP4□□□□□ -1.77
YDR034C-CYDR034C-C NDC1P32500 655 aa4□□□□□ -1.77
YDR034C-CYDR034C-C PAH1P32567 862 aa4□□□□□ -1.77
YDR034C-CYDR034C-C VID27P40157 782 aa4□□□□□ -1.77
YDR034C-CYDR034C-C CSM2P40465 213 aa4□□□□□ -1.77
YDR034C-CYDR034C-C APT1P49435 187 aaKnown RBP4□□□□□ -1.77
YDR034C-CYDR034C-C ALT2P52892 507 aa4□□□□□ -1.77
YDR034C-CYDR034C-C VID30P53076 958 aa4□□□□□ -1.77
YDR034C-CYDR034C-C SPE4Q12455 300 aa4□□□□□ -1.77
YDR034C-CYDR034C-C YBR298C-AQ8TGK4 73 aa4□□□□□ -1.77
YDR034C-CYDR034C-C MRS3P10566 314 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C EST1P17214 699 aaPredicted RBP3.99□□□□□ -1.77
YDR034C-CYDR034C-C BUD14P27637 709 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C SEF1P34228 1148 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C RTT101P47050 842 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C DSD1P53095 428 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C YPL272CQ08984 517 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C SET6Q12529 373 aa3.99□□□□□ -1.77
YDR034C-CYDR034C-C APE1P14904 514 aa3.98□□□□□ -1.77
YDR034C-CYDR034C-C SIP2P34164 415 aaKnown RBP3.98□□□□□ -1.77
YDR034C-CYDR034C-C OSH3P38713 996 aaKnown RBP3.98□□□□□ -1.77
YDR034C-CYDR034C-C ALG5P40350 334 aa3.98□□□□□ -1.77
YDR034C-CYDR034C-C ROK1P45818 564 aaPredicted RBP3.98□□□□□ -1.77
YDR034C-CYDR034C-C BUD32P53323 261 aa3.98□□□□□ -1.77
YDR034C-CYDR034C-C IPI3P53877 555 aa3.98□□□□□ -1.77
YDR034C-CYDR034C-C ART10P18634 518 aaKnown RBP3.97□□□□□ -1.77
YDR034C-CYDR034C-C FLC2P39719 783 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C TMA108P40462 946 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C YJR154WP47181 346 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C IMP4P53941 290 aaKnown RBP3.97□□□□□ -1.77
YDR034C-CYDR034C-C MSC1Q03104 513 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C NGL3Q03210 505 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C YMR087WQ04299 284 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C YKU80Q04437 629 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C RCN2Q12044 265 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C NMD4Q12129 218 aa3.97□□□□□ -1.77
YDR034C-CYDR034C-C RPL15AP05748 204 aaKnown RBP3.96□□□□□ -1.77
YDR034C-CYDR034C-C NOP4P37838 685 aaKnown RBP3.96□□□□□ -1.77
YDR034C-CYDR034C-C YBP1P38315 674 aa3.96□□□□□ -1.77
YDR034C-CYDR034C-C VPS52P39904 641 aa3.96□□□□□ -1.77
YDR034C-CYDR034C-C RPH1P39956 796 aa3.96□□□□□ -1.77
YDR034C-CYDR034C-C RBG2P53295 368 aaKnown RBP3.96□□□□□ -1.77
YDR034C-CYDR034C-C GIS2P53849 153 aaKnown RBP RIP-Chip data3.96□□□□□ -1.77not detected
YDR034C-CYDR034C-C RPM2Q02773 1202 aa3.96□□□□□ -1.77
YDR034C-CYDR034C-C HCR1Q05775 265 aaKnown RBP3.96□□□□□ -1.77
YDR034C-CYDR034C-C YEH1Q07804 573 aa3.96□□□□□ -1.77
YDR034C-CYDR034C-C HSH49Q99181 213 aaPredicted RBP3.96□□□□□ -1.77
YDR034C-CYDR034C-C YPT6Q99260 215 aa3.96□□□□□ -1.77
YDR034C-CYDR034C-C SEM1O94742 89 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C PRP16P15938 1071 aaPredicted RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C AAC3P18238 307 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C CPR3P25719 182 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C PEP3P27801 918 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C REG2P38232 338 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C YHR210CP38893 341 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C NPR2P39923 615 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C NOP16P40007 231 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C YJL213WP40896 331 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C YFR016CP43597 1233 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C ALK1P43633 760 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C IVY1Q04934 453 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C YDR056CQ12025 205 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C GDH1P07262 454 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C MRP13P12686 339 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C SAN1P22470 610 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C GFD2P25370 566 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C PAP1P29468 568 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C KRE9P39005 276 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C YDL186WP48568 277 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C TOF2Q02208 771 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C ERP1Q05359 219 aaKnown RBP3.95□□□□□ -1.78
YDR034C-CYDR034C-C THP1Q08231 455 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C YDL009CQ12210 107 aa3.95□□□□□ -1.78
YDR034C-CYDR034C-C RPL20AP0CX23 172 aaKnown RBP3.94□□□□□ -1.78
YDR034C-CYDR034C-C RPL20BP0CX24 172 aaPredicted RBP3.94□□□□□ -1.78
YDR034C-CYDR034C-C EXO70P19658 623 aa3.94□□□□□ -1.78
YDR034C-CYDR034C-C TIF3P34167 436 aaKnown RBP3.94□□□□□ -1.78
YDR034C-CYDR034C-C CCT6P39079 546 aa3.94□□□□□ -1.78
YDR034C-CYDR034C-C SCD6P45978 349 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
YDR034C-CYDR034C-C IMD4P50094 524 aaKnown RBP3.94□□□□□ -1.78
YDR034C-CYDR034C-C YGR066CP53242 292 aa3.94□□□□□ -1.78
YDR034C-CYDR034C-C RLI1Q03195 608 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms