RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 RABGGTBP53611 331 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 SLFNL1Q499Z3 407 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 SLFN13Q68D06 897 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 STK11IPQ8N1F8 1099 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 PHOSPHO2Q8TCD6 241 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 FGD4Q96M96 766 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 STRBPQ96SI9 672 aaKnown RBP17.92■□□□□ 0.46
SRRM4-204ENST00000641899 NACAP1Q9BZK3 213 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 TRPV6Q9H1D0 765 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 RNF146Q9NTX7 359 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 POLR3EQ9NVU0 708 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 PLXNA1Q9UIW2 1896 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
SRRM4-204ENST00000641899 APPP05067 770 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 TSPY3P0CV98 308 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 TSPY8P0CW00 308 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 CNTN2Q02246 1040 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 PDE4BQ07343 736 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 CEP95Q96GE4 821 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 GPATCH3Q96I76 525 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 SLC9A7Q96T83 725 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 VTA1Q9NP79 307 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
SRRM4-204ENST00000641899 DDX19BQ9UMR2 479 aa17.91■□□□□ 0.46
SRRM4-204ENST00000641899 ZNFX1Q9P2E3 1918 aaKnown RBP17.91■□□□□ 0.46
SRRM4-204ENST00000641899 MYH8P13535 1937 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 ZFYP08048 801 aaPredicted RBP17.9■□□□□ 0.46
SRRM4-204ENST00000641899 SLC1A4P43007 532 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 CPT1AP50416 773 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 TMEM31Q5JXX7 168 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 LRRC47Q8N1G4 583 aaKnown RBP17.9■□□□□ 0.46
SRRM4-204ENST00000641899 RETREG2Q8NC44 543 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 STAG1Q8WVM7 1258 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 MPHOSPH6Q99547 160 aaKnown RBP17.9■□□□□ 0.46
SRRM4-204ENST00000641899 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
SRRM4-204ENST00000641899 ADD3Q9UEY8 706 aaKnown RBP17.9■□□□□ 0.46
SRRM4-204ENST00000641899 COL11A1P12107 1806 aaPredicted RBP17.9■□□□□ 0.46
SRRM4-204ENST00000641899 UMODL1Q5DID0 1318 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 RAD50Q92878 1312 aa17.9■□□□□ 0.46
SRRM4-204ENST00000641899 PARP14Q460N5 1801 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 ALAS1P13196 640 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 SMPD1P17405 629 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
SRRM4-204ENST00000641899 TFF2Q03403 129 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 KIAA1211Q6ZU35 1233 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 APPBP2Q92624 585 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 GMCL1Q96IK5 515 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 NECAB3Q96P71 396 aaPredicted RBP17.89■□□□□ 0.45
SRRM4-204ENST00000641899 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 WNT8AQ9H1J5 351 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 MTCH2Q9Y6C9 303 aa17.89■□□□□ 0.45
SRRM4-204ENST00000641899 LOC102724159A0A0B4J2E5 919 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 SOWAHBA6NEL2 793 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 CA3P07451 260 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 PWP2Q15269 919 aaKnown RBP17.88■□□□□ 0.45
SRRM4-204ENST00000641899 HLA-CQ95604 372 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 SCLYQ96I15 445 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 ASTN1O14525 1302 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 TNKSO95271 1327 aa17.88■□□□□ 0.45
SRRM4-204ENST00000641899 KPNA6O60684 536 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 PLA2G6O60733 806 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 MYOGP15173 224 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 KCNQ1P51787 676 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 PSMC6P62333 389 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 BFSP2Q13515 415 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 DEFB128Q7Z7B8 93 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 NEDD1Q8NHV4 660 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 FTOQ9C0B1 505 aaKnown RBP eCLIP17.87■□□□□ 0.45
SRRM4-204ENST00000641899 ECHDC1Q9NTX5 307 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 GRIN2DO15399 1336 aa17.87■□□□□ 0.45
SRRM4-204ENST00000641899 PRDM1O75626 825 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 DUSP28Q4G0W2 176 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 FAM47CQ5HY64 1035 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 EEPD1Q7L9B9 569 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 FBXO16Q8IX29 292 aaPredicted RBP17.86■□□□□ 0.45
SRRM4-204ENST00000641899 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 ARNTL2Q8WYA1 636 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 MTG1Q9BT17 334 aaPredicted RBP17.86■□□□□ 0.45
SRRM4-204ENST00000641899 CYP39A1Q9NYL5 469 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 PNMA2Q9UL42 364 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 NOD1Q9Y239 953 aa17.86■□□□□ 0.45
SRRM4-204ENST00000641899 B4DLN1 442 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 PATL2C9JE40 543 aaKnown RBP17.85■□□□□ 0.45
SRRM4-204ENST00000641899 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
SRRM4-204ENST00000641899 GPAA1O43292 621 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 BAIAP3O94812 1187 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 MRPL12P52815 198 aaKnown RBP17.85■□□□□ 0.45
SRRM4-204ENST00000641899 HNRNPUQ00839 825 aaKnown RBP eCLIP17.85■□□□□ 0.45
SRRM4-204ENST00000641899 TTLL4Q14679 1199 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 TAPT1Q6NXT6 567 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 NSMFQ6X4W1 530 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 CCDC155Q8N6L0 562 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms