RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MYCBPAPQ8TBZ2 947 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 GSDMAQ96QA5 445 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 OSBPL9Q96SU4 736 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 LIMA1Q9UHB6 759 aaKnown RBP15.29■□□□□ 0.04
SCARB2-227ENST00000640957 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 TOPAZ1Q8N9V7 1692 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 TUBBP07437 444 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 GBP2P32456 591 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-227ENST00000640957 NBPF9Q3BBW0 867 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 CCDC121Q6ZUS5 278 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 MIEF2Q96C03 454 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 STIM2Q9P246 746 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 MAGEC2Q9UBF1 373 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-227ENST00000640957 SPATA31A3Q5VYP0 1347 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 CHUKO15111 745 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 ADD2P35612 726 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 KRT83P78385 493 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 CCDC178Q5BJE1 867 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 LRRC4CQ9HCJ2 640 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 SNX12Q9UMY4 172 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 LTN1O94822 1766 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 DCDC2CA8MYV0 355 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 CYLC1P35663 651 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-227ENST00000640957 GFPT1Q06210 699 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-227ENST00000640957 IL17AQ16552 155 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 TUBGCP2Q9BSJ2 902 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
SCARB2-227ENST00000640957 NALCNQ8IZF0 1738 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 NMT2O60551 498 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 TTC38Q5R3I4 469 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 PNMA8AQ86V59 439 aaPredicted RBP15.27■□□□□ 0.04
SCARB2-227ENST00000640957 FAM228AQ86W67 206 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 MSL3Q8N5Y2 521 aaKnown RBP15.27■□□□□ 0.04
SCARB2-227ENST00000640957 MDM1Q8TC05 714 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 TACO1Q9BSH4 297 aaKnown RBP15.27■□□□□ 0.04
SCARB2-227ENST00000640957 TRIM31Q9BZY9 425 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 L3MBTL1Q9Y468 752 aa15.27■□□□□ 0.04
SCARB2-227ENST00000640957 PPP1R37O75864 691 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 EIF4A3P38919 411 aaKnown RBP15.27■□□□□ 0.03
SCARB2-227ENST00000640957 STAT6P42226 847 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.03
SCARB2-227ENST00000640957 TCP11Q8WWU5 503 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 FOXP1Q9H334 677 aaPredicted RBP15.27■□□□□ 0.03
SCARB2-227ENST00000640957 LRRC37A3O60309 1634 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 RASSF10A6NK89 507 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.03
SCARB2-227ENST00000640957 DEXIO95424 95 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.03
SCARB2-227ENST00000640957 VAV2P52735 878 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 PTGISQ16647 500 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 UHMK1Q8TAS1 419 aaKnown RBP15.27■□□□□ 0.03
SCARB2-227ENST00000640957 RIPOR2Q9Y4F9 1068 aa15.27■□□□□ 0.03
SCARB2-227ENST00000640957 CCDC189A1A4V9 331 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 TARSL2A2RTX5 802 aaKnown RBP15.26■□□□□ 0.03
SCARB2-227ENST00000640957 PAFAH1B1P43034 410 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 AMOTL1Q8IY63 956 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 TMEM87BQ96K49 555 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 EPN3Q9H201 632 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCARB2-227ENST00000640957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCARB2-227ENST00000640957 TPX2Q9ULW0 747 aaKnown RBP15.26■□□□□ 0.03
SCARB2-227ENST00000640957 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 TACC1O75410 805 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 CLTAP09496 248 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 FCER1AP12319 257 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 TUBB4BP68371 445 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 BIRC2Q13490 618 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 RRAGAQ7L523 313 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 LCORLQ8N3X6 602 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 STRBPQ96SI9 672 aaKnown RBP15.26■□□□□ 0.03
SCARB2-227ENST00000640957 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
SCARB2-227ENST00000640957 RWDD2AQ9UIY3 292 aa15.26■□□□□ 0.03
SCARB2-227ENST00000640957 KRT2P35908 639 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 EPHB4P54760 987 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 CYB5D1Q6P9G0 228 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
SCARB2-227ENST00000640957 WASF1Q92558 559 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 OSBPL7Q9BZF2 842 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 MCM8Q9UJA3 840 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 NFAT5O94916 1531 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 WDR17Q8IZU2 1322 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 EHHADHQ08426 723 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 SH3RF1Q7Z6J0 888 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 FBXL16Q8N461 479 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 MARCH10Q8NA82 808 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-227ENST00000640957 GPKOWQ92917 476 aaPredicted RBP eCLIP15.25■□□□□ 0.03
SCARB2-227ENST00000640957 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 CYFIP2Q96F07 1278 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 ENO4A6NNW6 628 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 SNCBQ16143 134 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 AKNAD1Q5T1N1 836 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 HIBCHQ6NVY1 386 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-227ENST00000640957 PARP9Q8IXQ6 854 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 TANGO6Q9C0B7 1094 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms