RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
MECP2-226ENST00000640414 UBE2ZQ9H832 354 aaPredicted RBP13.79□□□□□ -0.2
MECP2-226ENST00000640414 GNEQ9Y223 722 aaKnown RBP13.79□□□□□ -0.2
MECP2-226ENST00000640414 BRWD1Q9NSI6 2320 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 RAD21O60216 631 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 RAB11FIP3O75154 756 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 CYP2C9P11712 490 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 ACTN1P12814 892 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 LEXMQ3ZCV2 418 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 NOL8Q76FK4 1167 aaKnown RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 TLK2Q86UE8 772 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 ANKRD35Q8N283 1001 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 ALDH8A1Q9H2A2 487 aaPredicted RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
MECP2-226ENST00000640414 TRMT13Q9NUP7 481 aaKnown RBP13.78□□□□□ -0.2
MECP2-226ENST00000640414 KIF28PB7ZC32 967 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 SMARCA5O60264 1052 aaPredicted RBP13.77□□□□□ -0.21
MECP2-226ENST00000640414 HSP90AB4PQ58FF6 505 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
MECP2-226ENST00000640414 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 CPXCR1Q8N123 301 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 EAF2Q96CJ1 260 aaPredicted RBP13.77□□□□□ -0.21
MECP2-226ENST00000640414 CCDC17Q96LX7 622 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 PHOX2BQ99453 314 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 NUP88Q99567 741 aaPredicted RBP13.77□□□□□ -0.21
MECP2-226ENST00000640414 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
MECP2-226ENST00000640414 LCHNA4D1U4 455 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 DYNC1LI2O43237 492 aaPredicted RBP13.76□□□□□ -0.21
MECP2-226ENST00000640414 DCXO43602 365 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 SMPD1P17405 629 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 KCNA5P22460 613 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 RHPN1Q8TCX5 695 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 LNPKQ9C0E8 428 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 AP5M1Q9H0R1 490 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 PTPRSQ13332 1948 aa13.76□□□□□ -0.21
MECP2-226ENST00000640414 TNKSO95271 1327 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 CYP2D7A0A087X1C5 515 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 POTEB3A0JP26 581 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 ZEB2O60315 1214 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 PDE6AP16499 860 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 CDK8P49336 464 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 CNTN2Q02246 1040 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 PTCRAQ6ISU1 281 aaPredicted RBP13.75□□□□□ -0.21
MECP2-226ENST00000640414 POTEBQ6S5H4 581 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 KIF1BPQ96EK5 621 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
MECP2-226ENST00000640414 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
MECP2-226ENST00000640414 ZNF536O15090 1300 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 SUPT20HL2P0C7V6 817 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 PDE4AP27815 886 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 RFC2P35250 354 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 SLC9C2Q5TAH2 1124 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
MECP2-226ENST00000640414 BCL11AQ9H165 835 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 SUGCTQ9HAC7 445 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 IL1RAPL2Q9NP60 686 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 FBXO40Q9UH90 709 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 ZNF318Q5VUA4 2279 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 TANC1Q9C0D5 1861 aa13.74□□□□□ -0.21
MECP2-226ENST00000640414 ZNF532Q9HCE3 1301 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 BAZ2AQ9UIF9 1905 aaKnown RBP13.73□□□□□ -0.21
MECP2-226ENST00000640414 PRKAB2O43741 272 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 ZBED4O75132 1171 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 IQCF3P0C7M6 154 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 C16orf86Q6ZW13 317 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 TMCO2Q7Z6W1 182 aaPredicted RBP13.73□□□□□ -0.21
MECP2-226ENST00000640414 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
MECP2-226ENST00000640414 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
MECP2-226ENST00000640414 ARMT1Q9H993 441 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 PDGFCQ9NRA1 345 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 MTUS1Q9ULD2 1270 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 DDX49Q9Y6V7 483 aaKnown RBP13.73□□□□□ -0.21
MECP2-226ENST00000640414 WDFY4Q6ZS81 3184 aa13.73□□□□□ -0.21
MECP2-226ENST00000640414 TCRBV5S4A2TA0A5A2 114 aa13.72□□□□□ -0.21
MECP2-226ENST00000640414 SOWAHBA6NEL2 793 aa13.72□□□□□ -0.21
MECP2-226ENST00000640414 OTUD7AQ8TE49 926 aaPredicted RBP13.72□□□□□ -0.21
MECP2-226ENST00000640414 SLC38A10Q9HBR0 1119 aa13.72□□□□□ -0.21
MECP2-226ENST00000640414 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
MECP2-226ENST00000640414 Q9Y3F1 56 aa13.72□□□□□ -0.21
MECP2-226ENST00000640414 CTDP1Q9Y5B0 961 aaPredicted RBP13.72□□□□□ -0.21
MECP2-226ENST00000640414 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
MECP2-226ENST00000640414 ASB14A6NK59 587 aa13.71□□□□□ -0.21
MECP2-226ENST00000640414 F5H6K3 240 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms