RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 DDR1Q08345 913 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 ZNF569Q5MCW4 686 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 ZSWIM4Q9H7M6 989 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 ST7Q9NRC1 585 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 ABL1P00519 1130 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 PDHBP11177 359 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 FECHP22830 423 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 CYP26C1Q6V0L0 522 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 TMTC1Q8IUR5 882 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
RTTN-216ENST00000640376 TBC1D22AQ8WUA7 517 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 EXOC1Q9NV70 894 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 LGALS16A8MUM7 142 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 SEC31AO94979 1220 aaKnown RBP10.07□□□□□ -0.8
RTTN-216ENST00000640376 MYL1P05976 194 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 PDE4DQ08499 809 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 AK8Q96MA6 479 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 TRIM9Q9C026 710 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
RTTN-216ENST00000640376 ZHX1Q9UKY1 873 aaPredicted RBP10.07□□□□□ -0.8
RTTN-216ENST00000640376 TTF2Q9UNY4 1162 aaKnown RBP10.07□□□□□ -0.8
RTTN-216ENST00000640376 FHOD1Q9Y613 1164 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
RTTN-216ENST00000640376 SPATA31A6Q5VVP1 1343 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 PNMA6AP0CW24 399 aaPredicted RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 UTP14CQ5TAP6 766 aaKnown RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 TTI2Q6NXR4 508 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 DPP8Q6V1X1 898 aaPredicted RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 MB21D1Q8N884 522 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 COA7Q96BR5 231 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 GTPBP4Q9BZE4 634 aaKnown RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 THAP9Q9H5L6 903 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 PRDM4Q9UKN5 801 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 ARFGEF1Q9Y6D6 1849 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 TTC26A0AVF1 554 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 B4DLN1 442 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 PPEF1O14829 653 aaPredicted RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 BBOX1O75936 387 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 FCER1AP12319 257 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 AKR1B1P15121 316 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 TXKP42681 527 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 BMS1Q14692 1282 aaKnown RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 CSGALNACT2Q8N6G5 542 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 FAM163AQ96GL9 167 aaPredicted RBP10.06□□□□□ -0.8
RTTN-216ENST00000640376 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 MAGEF1Q9HAY2 307 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 GPCPD1Q9NPB8 672 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 FAM53CQ9NYF3 392 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 PLIN4Q96Q06 1357 aa10.06□□□□□ -0.8
RTTN-216ENST00000640376 AFF2P51816 1311 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 RSRC2Q7L4I2 434 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 HPS3Q969F9 1004 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 CCDC47Q96A33 483 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 CHP1Q99653 195 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 MXD3Q9BW11 206 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 DDX4Q9NQI0 724 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 SLC37A4O43826 429 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 TFRCP02786 760 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 STK4Q13043 487 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 MTMR4Q9NYA4 1195 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 ZRANB2O95218 330 aaKnown RBP eCLIP10.05□□□□□ -0.8
RTTN-216ENST00000640376 TDP2O95551 362 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 ADCY7P51828 1080 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 CALCRLQ16602 461 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 P2RX5Q93086 422 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 CALML4Q96GE6 196 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
RTTN-216ENST00000640376 RIOX1Q9H6W3 641 aa10.05□□□□□ -0.8
RTTN-216ENST00000640376 ESYT2A0FGR8 921 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 CTAGE9A4FU28 777 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 ARHGAP25P42331 645 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 SCNN1DP51172 638 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 DHTKD1Q96HY7 919 aaPredicted RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 TRIM10Q9UDY6 481 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 LUC7L2Q9Y383 392 aaKnown RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 BRWD3Q6RI45 1802 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 POTEMA6NI47 508 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 CCNE1P24864 410 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 SMARCA1P28370 1054 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 HOXA10P31260 410 aaPredicted RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 NOVP48745 357 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms