RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SDR42E1Q8WUS8 393 aa16.39■□□□□ 0.21
HLA-C-210ENST00000640219 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
HLA-C-210ENST00000640219 DCP1AQ9NPI6 582 aaPredicted RBP16.39■□□□□ 0.21
HLA-C-210ENST00000640219 ARHGEF15O94989 841 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 ACTN1P12814 892 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 DEFB128Q7Z7B8 93 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 FGD4Q96M96 766 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 SLC9A7Q96T83 725 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 PAG1Q9NWQ8 432 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 ASTN1O14525 1302 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
HLA-C-210ENST00000640219 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
HLA-C-210ENST00000640219 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 ZEB2O60315 1214 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 ALADP13716 330 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 ATP5JP18859 108 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 PDE4AP27815 886 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 FSCN1Q16658 493 aaKnown RBP16.37■□□□□ 0.21
HLA-C-210ENST00000640219 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 FAM178BQ8IXR5 827 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 ANKRD35Q8N283 1001 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 KATNBL1Q9H079 304 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
HLA-C-210ENST00000640219 TCRBV5S4A2TA0A5A2 114 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 LPXNO60711 386 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 SSTR3P32745 418 aaPredicted RBP16.36■□□□□ 0.21
HLA-C-210ENST00000640219 PSMC6P62333 389 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 TLK2Q86UE8 772 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.36■□□□□ 0.21
HLA-C-210ENST00000640219 HAUS7Q99871 368 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 AP5M1Q9H0R1 490 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 KANSL2Q9H9L4 492 aa16.36■□□□□ 0.21
HLA-C-210ENST00000640219 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
HLA-C-210ENST00000640219 CDK8P49336 464 aa16.35■□□□□ 0.21
HLA-C-210ENST00000640219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
HLA-C-210ENST00000640219 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
HLA-C-210ENST00000640219 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
HLA-C-210ENST00000640219 ALDH8A1Q9H2A2 487 aaPredicted RBP16.35■□□□□ 0.21
HLA-C-210ENST00000640219 UBE2ZQ9H832 354 aaPredicted RBP16.35■□□□□ 0.21
HLA-C-210ENST00000640219 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
HLA-C-210ENST00000640219 LMCD1Q9NZU5 365 aa16.35■□□□□ 0.21
HLA-C-210ENST00000640219 GNEQ9Y223 722 aaKnown RBP16.35■□□□□ 0.21
HLA-C-210ENST00000640219 MCM3APO60318 1980 aa16.35■□□□□ 0.21
HLA-C-210ENST00000640219 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 DYNC1LI2O43237 492 aaPredicted RBP16.34■□□□□ 0.21
HLA-C-210ENST00000640219 PRKAB2O43741 272 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 ZBED4O75132 1171 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 IGHDP01880 384 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 CYP2C9P11712 490 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 SPRED2Q7Z698 418 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 PRPF38AQ8NAV1 312 aaKnown RBP16.34■□□□□ 0.21
HLA-C-210ENST00000640219 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
HLA-C-210ENST00000640219 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 MYH8P13535 1937 aa16.34■□□□□ 0.21
HLA-C-210ENST00000640219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.33■□□□□ 0.2
HLA-C-210ENST00000640219 ADD2P35612 726 aa16.33■□□□□ 0.2
HLA-C-210ENST00000640219 AAMPQ13685 434 aa16.33■□□□□ 0.2
HLA-C-210ENST00000640219 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
HLA-C-210ENST00000640219 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
HLA-C-210ENST00000640219 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.2
HLA-C-210ENST00000640219 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
HLA-C-210ENST00000640219 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
HLA-C-210ENST00000640219 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
HLA-C-210ENST00000640219 MBD4O95243 580 aa16.32■□□□□ 0.2
HLA-C-210ENST00000640219 IL9P15248 144 aa16.32■□□□□ 0.2
HLA-C-210ENST00000640219 PTGS1P23219 599 aa16.32■□□□□ 0.2
HLA-C-210ENST00000640219 RFC2P35250 354 aa16.32■□□□□ 0.2
HLA-C-210ENST00000640219 CNTN2Q02246 1040 aa16.32■□□□□ 0.2
HLA-C-210ENST00000640219 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
HLA-C-210ENST00000640219 GDPD5Q8WTR4 605 aa16.32■□□□□ 0.2
HLA-C-210ENST00000640219 FTOQ9C0B1 505 aaKnown RBP eCLIP16.32■□□□□ 0.2
HLA-C-210ENST00000640219 ZNF536O15090 1300 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 TNKSO95271 1327 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 DCXO43602 365 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 SMPD1P17405 629 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 KCNA5P22460 613 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 C12orf60Q5U649 245 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 C16orf86Q6ZW13 317 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 AMOTL1Q8IY63 956 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
HLA-C-210ENST00000640219 ATP8A2Q9NTI2 1148 aa16.31■□□□□ 0.2
HLA-C-210ENST00000640219 COL4A4P53420 1690 aaPredicted RBP16.3■□□□□ 0.2
HLA-C-210ENST00000640219 SALL3Q9BXA9 1300 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 ASB14A6NK59 587 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 F5H6K3 240 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 KLRC3Q07444 240 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
HLA-C-210ENST00000640219 PTCRAQ6ISU1 281 aaPredicted RBP16.3■□□□□ 0.2
HLA-C-210ENST00000640219 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms