RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PTK2Q05397 1052 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 FAM47AQ5JRC9 791 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 CDAN1Q8IWY9 1227 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 BRF1Q92994 677 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 TMEM87BQ96K49 555 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 DEFB129Q9H1M3 183 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 LIMCH1Q9UPQ0 1083 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 IQCA1LA6NCM1 817 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TSPY2A6NKD2 308 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 POTECB2RU33 542 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 SH2B2O14492 632 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 CTSHP09668 335 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TFAP4Q01664 338 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 USP50Q70EL3 339 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 ZNF444Q8N0Y2 327 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 CRACR2BQ8N4Y2 399 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 IGDCC4Q8TDY8 1250 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TEPSINQ96N21 525 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 UBAC1Q9BSL1 405 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TAF1DQ9H5J8 278 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 ANGEL1Q9UNK9 670 aaKnown RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 PITPNM2Q9BZ72 1349 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 IFIT3O14879 490 aaKnown RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 PPP1R12AO14974 1030 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 LIFRP42702 1097 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 AMPD3Q01432 767 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 SART3Q15020 963 aaKnown RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 OXLD1Q5BKU9 147 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 ALG1LQ6GMV1 187 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TATDN1Q6P1N9 297 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 IQCA1Q86XH1 822 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 ZKSCAN3Q9BRR0 538 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 LY9Q9HBG7 655 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 HERC5Q9UII4 1024 aaKnown RBP9.28□□□□□ -0.92
SCARB2-220ENST00000640076 PRR12Q9ULL5 1215 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TPCN1Q9ULQ1 816 aa9.28□□□□□ -0.92
SCARB2-220ENST00000640076 TNKSO95271 1327 aa9.27□□□□□ -0.92
SCARB2-220ENST00000640076 FZD6O60353 706 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 NMT2O60551 498 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 TSPY3P0CV98 308 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 TSPY8P0CW00 308 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 EVCP57679 992 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 APOBRQ0VD83 1088 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 SEC23AQ15436 765 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 ENOX2Q16206 610 aaKnown RBP9.27□□□□□ -0.93
SCARB2-220ENST00000640076 SWT1Q5T5J6 900 aaKnown RBP9.27□□□□□ -0.93
SCARB2-220ENST00000640076 NME8Q8N427 588 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 ENAHQ8N8S7 591 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-220ENST00000640076 TSEN2Q8NCE0 465 aaKnown RBP9.27□□□□□ -0.93
SCARB2-220ENST00000640076 NEDD1Q8NHV4 660 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 ZSCAN10Q96SZ4 725 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-220ENST00000640076 TMX1Q9H3N1 280 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 SENP2Q9HC62 589 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 PLIN4Q96Q06 1357 aa9.27□□□□□ -0.93
SCARB2-220ENST00000640076 GREB1LQ9C091 1923 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-220ENST00000640076 ERICH2A1L162 156 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 HMGB1P1B2RPK0 211 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 LARGE1O95461 756 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 AKR1B1P15121 316 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 MAP3K10Q02779 954 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 WTAPQ15007 396 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 ME3Q16798 604 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 PDXDC2PQ6P474 469 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 SGMS1Q86VZ5 419 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 ZSCAN31Q96LW9 406 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 SH2B1Q9NRF2 756 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 IL17RBQ9NRM6 502 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 TCP11L1Q9NUJ3 509 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 PPP2R3BQ9Y5P8 575 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 M0R2N6 131 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 ATMINO43313 823 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 PDGFRBP09619 1106 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 CERKLQ49MI3 558 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 PNMA8AQ86V59 439 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 DCPSQ96C86 337 aaKnown RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 CCDC17Q96LX7 622 aa9.26□□□□□ -0.93
SCARB2-220ENST00000640076 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
SCARB2-220ENST00000640076 IGKV6D-41A0A0C4DH26 115 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 KLF18A0A0U1RQI7 1052 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 PPFIA4O75335 1185 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 PDIA3P30101 505 aaKnown RBP9.25□□□□□ -0.93
SCARB2-220ENST00000640076 CUL4AQ13619 759 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 CCDC178Q5BJE1 867 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 IFIT1BQ5T764 474 aaKnown RBP9.25□□□□□ -0.93
SCARB2-220ENST00000640076 NBPF12Q5TAG4 269 aaPredicted RBP9.25□□□□□ -0.93
SCARB2-220ENST00000640076 PRAMEF18Q5VWM3 479 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 APOA5Q6Q788 366 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 MIGA2Q7L4E1 593 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 DGKHQ86XP1 1220 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 ANKS1AQ92625 1134 aa9.25□□□□□ -0.93
SCARB2-220ENST00000640076 ZNF274Q96GC6 653 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms