RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 TIFAQ96CG3 184 aa11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 THEGQ9P2T0 379 aa11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 PARP14Q460N5 1801 aa11.12□□□□□ -0.63
MCF2L2-214ENST00000640043 MYH8P13535 1937 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 DCDC2CA8MYV0 355 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 IPO8O15397 1037 aaKnown RBP11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 ICMTO60725 284 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 COBLO75128 1261 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 MRPS5P82675 430 aaKnown RBP11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 ZNF746Q6NUN9 644 aaPredicted RBP11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 ASB2Q96Q27 587 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 TMEM39AQ9NV64 488 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
MCF2L2-214ENST00000640043 A0A1W2PQ45 241 aaPredicted RBP11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 A0A1W2PQY0 241 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 ABL1P00519 1130 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 TIMP1P01033 207 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 AKR1A1P14550 325 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 CYP7A1P22680 504 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 SHMT1P34896 483 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 MAP3K12Q12852 859 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 SWI5Q1ZZU3 235 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 TMEM179Q6ZVK1 233 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 USP38Q8NB14 1042 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 SLC44A5Q8NCS7 719 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 FERMT2Q96AC1 680 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 FAM122AQ96E09 287 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 C1QTNF1Q9BXJ1 281 aa11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
MCF2L2-214ENST00000640043 ELP1O95163 1332 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 H3BRB1 525 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 ITGB8P26012 769 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 EPHB4P54760 987 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 GABPAQ06546 454 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 FAAP100Q0VG06 881 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 PTK7Q13308 1070 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 RAB30Q15771 203 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 MFSD5Q6N075 450 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 PSRC1Q6PGN9 363 aaPredicted RBP11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 ADAMTS5Q9UNA0 930 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 MUC6Q6W4X9 2439 aa11.09□□□□□ -0.63
MCF2L2-214ENST00000640043 NAV1Q8NEY1 1877 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 COL11A1P12107 1806 aaPredicted RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 WDR46O15213 610 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 ADAMTS4O75173 837 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 IDH1O75874 414 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 CST5P28325 142 aaPredicted RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 ZAP70P43403 619 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 DYNLL1P63167 89 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 KCTD2Q14681 263 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 SEPT2Q15019 361 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 AAK1Q2M2I8 961 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 ANO1Q5XXA6 986 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 RIOX2Q8IUF8 465 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 PMM1Q92871 262 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 RNF34Q969K3 372 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 DBNDD2Q9BQY9 259 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 MTIF3Q9H2K0 278 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 STARD7Q9NQZ5 370 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 TBX21Q9UL17 535 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 COL4A3BPQ9Y5P4 624 aa11.08□□□□□ -0.64
MCF2L2-214ENST00000640043 PNMA6EA0A0J9YXQ4 647 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 FLOT1O75955 427 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 POLR3DP05423 398 aaPredicted RBP11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 SCNN1AP37088 669 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 ACLYP53396 1101 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 RARSP54136 660 aaKnown RBP11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 PLS1Q14651 629 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 PRAMEF19Q5SWL8 479 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 TMEM199Q8N511 208 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 PCSK9Q8NBP7 692 aaKnown RBP11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 UHRF1Q96T88 793 aaPredicted RBP11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 MMP19Q99542 508 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 CRNKL1Q9BZJ0 848 aaKnown RBP11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
MCF2L2-214ENST00000640043 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms