RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 DISC1Q9NRI5 854 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 TRPM3Q9HCF6 1732 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-221ENST00000639955 SPA17Q15506 151 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 NPY5RQ15761 445 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 PNPLA7Q6ZV29 1317 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
NECAP1-221ENST00000639955 HDXQ7Z353 690 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 POTEDQ86YR6 584 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-221ENST00000639955 PANX2Q96RD6 677 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 MXD3Q9BW11 206 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 RBM28Q9NW13 759 aaKnown RBP8.61□□□□□ -1.03
NECAP1-221ENST00000639955 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
NECAP1-221ENST00000639955 MYH13Q9UKX3 1938 aa8.61□□□□□ -1.03
NECAP1-221ENST00000639955 ERVV-1B6SEH8 477 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 EIF3JO75822 258 aaKnown RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 CACNB3P54284 484 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 FUT2Q10981 343 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 PARP10Q53GL7 1025 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 ZNF658Q5TYW1 1059 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 ANKRD40Q6AI12 368 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 RSRC2Q7L4I2 434 aaKnown RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TTF2Q9UNY4 1162 aaKnown RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 EP400Q96L91 3159 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 ZNF804BA4D1E1 1349 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 MYH10P35580 1976 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 CYTH3O43739 400 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TDP2O95551 362 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 SCNN1DP51172 638 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TBC1D10BQ4KMP7 808 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 CDKAL1Q5VV42 579 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 NFRKBQ6P4R8 1299 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 FCHSD1Q86WN1 690 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TEX11Q8IYF3 940 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TBCKQ8TEA7 893 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 LRRC15Q8TF66 581 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 HDAC7Q8WUI4 952 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 CCDC47Q96A33 483 aaKnown RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 MYCBPQ99417 103 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 IL17RBQ9NRM6 502 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 REXO2Q9Y3B8 237 aaKnown RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 SAR1BQ9Y6B6 198 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 COL1A1P02452 1464 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 CCDC151A5D8V7 595 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 EPHB6O15197 1021 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 MYBL2P10244 700 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 GUCY2FP51841 1108 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 LLGL1Q15334 1064 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 PFKFB3Q16875 520 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 CCDC40Q4G0X9 1142 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TCERG1LQ5VWI1 586 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 MB21D1Q8N884 522 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
NECAP1-221ENST00000639955 EYA3Q99504 573 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 TMEM47Q9BQJ4 181 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 MYH6P13533 1939 aa8.6□□□□□ -1.03
NECAP1-221ENST00000639955 MYH7P12883 1935 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 ZEB2O60315 1214 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 UFL1O94874 794 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 CALM1P0DP23 149 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 CALM2P0DP24 149 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 CALM3P0DP25 149 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 ARHGAP25P42331 645 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 RASSF7Q02833 373 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 TCP10Q12799 353 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 KIF5AQ12840 1032 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 AMIGO3Q86WK7 504 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 MS4A14Q96JA4 679 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 NHEJ1Q9H9Q4 299 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-221ENST00000639955 RWDD2AQ9UIY3 292 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-221ENST00000639955 ZSCAN5CA6NGD5 496 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-221ENST00000639955 G3V3G9 751 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 RNF40O75150 1001 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 EPS15P42566 896 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 SPAG1Q07617 926 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 BEND6Q5SZJ8 279 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-221ENST00000639955 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 ZSCAN29Q8IWY8 852 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-221ENST00000639955 TXLNBQ8N3L3 684 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 COG1Q8WTW3 980 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
NECAP1-221ENST00000639955 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 RMND1Q9NWS8 449 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 BCL9O00512 1426 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
NECAP1-221ENST00000639955 NPHP3-ACAD11A0A0J9YXS1 232 aa8.59□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L5A8MUK1 530 aa8.59□□□□□ -1.04
NECAP1-221ENST00000639955 PDE2AO00408 941 aaPredicted RBP8.59□□□□□ -1.04
NECAP1-221ENST00000639955 CLSTN1O94985 981 aa8.59□□□□□ -1.04
NECAP1-221ENST00000639955 FTCDO95954 541 aa8.59□□□□□ -1.04
NECAP1-221ENST00000639955 CALML3P27482 149 aa8.59□□□□□ -1.04
NECAP1-221ENST00000639955 BTDP43251 543 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms