RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 CDKL5O76039 1030 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 POLR3DP05423 398 aaPredicted RBP10.06□□□□□ -0.8
PAX6-259ENST00000639916 FESP07332 822 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 CTAGE8P0CG41 777 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 IMPDH2P12268 514 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 UBASH3AP57075 661 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 USP4Q13107 963 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 MICALCLQ6ZW33 695 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 SPATA21Q7Z572 469 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 CTAGE6Q86UF2 777 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 CTAGE4Q8IX94 777 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 TBC1D5Q92609 795 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 GDAP1L1Q96MZ0 367 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 PAGR1Q9BTK6 254 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
PAX6-259ENST00000639916 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 SMNDC1O75940 238 aaKnown RBP eCLIP10.06□□□□□ -0.8
PAX6-259ENST00000639916 SETSIPP0DME0 302 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 TOP1P11387 765 aaKnown RBP10.06□□□□□ -0.8
PAX6-259ENST00000639916 POTEAQ6S8J7 498 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 B4GALNT2Q8NHY0 566 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 PHKBQ93100 1093 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 NSUN4Q96CB9 384 aaKnown RBP10.06□□□□□ -0.8
PAX6-259ENST00000639916 YIPF3Q9GZM5 350 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 BLOC1S6Q9UL45 172 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 TAOK2Q9UL54 1235 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 JAG2Q9Y219 1238 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
PAX6-259ENST00000639916 ERICH2A1L162 156 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 SPDYE3A6NKU9 549 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 PES1O00541 588 aaKnown RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 AHCYL1O43865 530 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 STX10O60499 249 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 MECOMQ03112 1051 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 GRAPQ13588 217 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 SLC30A9Q6PML9 568 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 SYNE3Q6ZMZ3 975 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 SLC51AQ86UW1 340 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 TSGA10Q9BZW7 698 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 LZTFL1Q9NQ48 299 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 SMIM22K7EJ46 135 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 BIN1O00499 593 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 ZSCAN9O15535 394 aaPredicted RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 TRIM37O94972 964 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 RANBP1P43487 201 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 PDCLQ13371 301 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 TUBB2AQ13885 445 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 WTAPQ15007 396 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 CWF19L1Q69YN2 538 aaKnown RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 NSMCE1Q8WV22 266 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 EPAS1Q99814 870 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 ALG1Q9BT22 464 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 TUBB2BQ9BVA1 445 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 PICK1Q9NRD5 415 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 FAM217BQ9NTX9 383 aaPredicted RBP10.05□□□□□ -0.8
PAX6-259ENST00000639916 FANCLQ9NW38 375 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 C4AP0C0L4 1744 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 CACNA1SQ13698 1873 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 CHD4Q14839 1912 aa10.05□□□□□ -0.8
PAX6-259ENST00000639916 GYS1P13807 737 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 PRDX5P30044 214 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
PAX6-259ENST00000639916 ME1P48163 572 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 NTRK3Q16288 839 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 KRT27Q7Z3Y8 459 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 CCDC114Q96M63 670 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 PLEKHG4BQ96PX9 1271 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 GOPCQ9HD26 462 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
PAX6-259ENST00000639916 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 A0A0U1RQJ8 604 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 SERPINC1P01008 464 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 AKAP17AQ02040 695 aaKnown RBP10.04□□□□□ -0.8
PAX6-259ENST00000639916 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 NAA35Q5VZE5 725 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 ARMCX6Q7L4S7 300 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 RBM12BQ8IXT5 1001 aaKnown RBP10.04□□□□□ -0.8
PAX6-259ENST00000639916 TMTC2Q8N394 836 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 SDF4Q9BRK5 362 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 UBAC1Q9BSL1 405 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 BRIP1Q9BX63 1249 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 AATFQ9NY61 560 aaKnown RBP eCLIP10.04□□□□□ -0.8
PAX6-259ENST00000639916 KIAA1468Q9P260 1216 aa10.04□□□□□ -0.8
PAX6-259ENST00000639916 GOLGA6BA6NDN3 693 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms