RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	KRT31	Q15323	416 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	TRIM74	Q86UV6	250 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	TRIM73	Q86UV7	250 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	ECT2	Q9H8V3	914 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	RMI1	Q9H9A7	625 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	SMARCAL1	Q9NZC9	954 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	FAF1	Q9UNN5	650 aa	Predicted RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	PTPRM	P28827	1452 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	NCAPH	Q15003	741 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	SLC9C1	Q4G0N8	1177 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	MORC4	Q8TE76	937 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	DMGDH	Q9UI17	866 aa	Known RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	FAM170A	A1A519	330 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	CCDC169	A6NNP5	214 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ALDH1L1	O75891	902 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	FTCD	O95954	541 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	BMP15	O95972	392 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	CASP1	P29466	404 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	MSH2	P43246	934 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	FMR1	Q06787	632 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	NUGGC	Q68CJ6	796 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZNF449	Q6P9G9	518 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ADAT2	Q7Z6V5	191 aa	Known RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	KLHL23	Q8NBE8	558 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	OR2W6P	Q8NHA6	318 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	SMC6	Q96SB8	1091 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZCWPW1	Q9H0M4	648 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	CNOT10	Q9H9A5	744 aa	Known RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	GPHN	Q9NQX3	736 aa	Predicted RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	BABAM1	Q9NWV8	329 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	PRR36	Q9H6K5	1346 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ACTN4	O43707	911 aa	Known RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	MCM7	P33993	719 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	MYLK4	Q86YV6	388 aa	Predicted RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ITFG2	Q969R8	447 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	ETNK1	Q9HBU6	452 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	TMEM2	Q9UHN6	1383 aa		12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	PAIP2B	Q9ULR5	123 aa	Known RBP	12.47	□□□□□ -0.41
SPIN3-231	ENST00000639895	RPS6KA3	P51812	740 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	ADCY1	Q08828	1119 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZNF483	Q8TF39	744 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	CCDC77	Q9BR77	488 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895		A0A087WZG4	1122 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	PPP6R2	O75170	966 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	CCND1	P24385	295 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	IGHMBP2	P38935	993 aa	Known RBP	12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	DNM2	P50570	870 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	PDE4B	Q07343	736 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	FBXO41	Q8TF61	875 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	DTNBP1	Q96EV8	351 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	TCP11L1	Q9NUJ3	509 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	TLR7	Q9NYK1	1049 aa	Known RBP	12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	TAF6L	Q9Y6J9	622 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	MYO3A	Q8NEV4	1616 aa		12.46	□□□□□ -0.41
SPIN3-231	ENST00000639895	CCT8L1P	A6NM43	557 aa		12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895		B4DLN1	442 aa		12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	SERPINB4	P48594	390 aa		12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	ACCSL	Q4AC99	568 aa		12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	GLE1	Q53GS7	698 aa	Known RBP	12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	SNRNP27	Q8WVK2	155 aa	Known RBP	12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	ANGEL1	Q9UNK9	670 aa	Known RBP	12.46	□□□□□ -0.42
SPIN3-231	ENST00000639895	CCDC194	A0A1B0GVG4	234 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ATP5J2-PTCD1	G3V325	749 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	NCK2	O43639	380 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	PTCD1	O75127	700 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ATP5J	P18859	108 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	MRPL12	P52815	198 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	MRPS35	P82673	323 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	CALCOCO2	Q13137	446 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	BIRC3	Q13489	604 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	CEP70	Q8NHQ1	597 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	BICDL2	A1A5D9	508 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	KLHL33	A6NCF5	533 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	CARS	P49589	748 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	EZH2	Q15910	746 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	BICDL1	Q6ZP65	573 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	NOSTRIN	Q8IVI9	506 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	NUDCD1	Q96RS6	583 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	MLXIP	Q9HAP2	919 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	VIRMA	Q69YN4	1812 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ARHGEF40	Q8TER5	1519 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895		A0A0U1RQJ8	604 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ANO9	A1A5B4	782 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	RNF113A	O15541	343 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	WTAP	Q15007	396 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	PPP4R3A	Q6IN85	833 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	FAM47E	Q6ZV65	393 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	PHLDB2	Q86SQ0	1253 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	CCDC65	Q8IXS2	484 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	SCYL3	Q8IZE3	742 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	MRRF	Q96E11	262 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ANAPC4	Q9UJX5	808 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895		B4E1Z4	1266 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ATF3	P18847	181 aa		12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	CCDC92	Q53HC0	331 aa	Predicted RBP	12.45	□□□□□ -0.42
SPIN3-231	ENST00000639895	ANKRD20A8P	Q5CZ79	823 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms