RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 CCT8L1PA6NM43 557 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 ACTN4O43707 911 aaKnown RBP12.21□□□□□ -0.46
SPIN3-230ENST00000639888 WTAPQ15007 396 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 MAP7D1Q3KQU3 841 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 PHLDB3Q6NSJ2 640 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 FAM47EQ6ZV65 393 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 TRIM74Q86UV6 250 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 TRIM73Q86UV7 250 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 METTL16Q86W50 562 aaKnown RBP12.21□□□□□ -0.46
SPIN3-230ENST00000639888 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.46
SPIN3-230ENST00000639888 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 ABCA9Q8IUA7 1624 aa12.21□□□□□ -0.46
SPIN3-230ENST00000639888 CCDC194A0A1B0GVG4 234 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 UPP2O95045 317 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 CCND1P24385 295 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 GLE1Q53GS7 698 aaKnown RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 KIAA0232Q92628 1395 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 MAP3K5Q99683 1374 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 ATP5JP18859 108 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 CCDC77Q9BR77 488 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 UBXN6Q9BZV1 441 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 FAF1Q9UNN5 650 aaPredicted RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 BICDL2A1A5D9 508 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 RPS6KA3P51812 740 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 NR1I3Q14994 352 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 KSR2Q6VAB6 950 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 MYLK4Q86YV6 388 aaPredicted RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 RETREG2Q8NC44 543 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 MORC4Q8TE76 937 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 RMI1Q9H9A7 625 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 GLI2P10070 1586 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 ZMYM6O95789 1325 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 LGR5O75473 907 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 MRPL12P52815 198 aaKnown RBP12.2□□□□□ -0.46
SPIN3-230ENST00000639888 CALCOCO2Q13137 446 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 SMC6Q96SB8 1091 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 MLXIPLQ9NP71 852 aa12.2□□□□□ -0.46
SPIN3-230ENST00000639888 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 TNRQ92752 1358 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 RANBP6O60518 1105 aaKnown RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 SERPINB4P48594 390 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 BIRC3Q13489 604 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 ANKRD20A8PQ5CZ79 823 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 KDM7AQ6ZMT4 941 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 BZW1Q7L1Q6 419 aaKnown RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 CMTR1Q8N1G2 835 aaKnown RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 ITFG2Q969R8 447 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 CCDC189A1A4V9 331 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 EME2A4GXA9 379 aaPredicted RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 H7C1D1 291 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 USP4Q13107 963 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 KRT26Q7Z3Y9 468 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 TAF1DQ9H5J8 278 aaPredicted RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 ATP10DQ9P241 1426 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 MRPS35P82673 323 aaKnown RBP12.19□□□□□ -0.46
SPIN3-230ENST00000639888 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 MFSD6Q6ZSS7 791 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 CEP70Q8NHQ1 597 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 SLC4A4Q9Y6R1 1079 aa12.19□□□□□ -0.46
SPIN3-230ENST00000639888 KLHL33A6NCF5 533 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPIN3-230ENST00000639888 HSPD1P10809 573 aaKnown RBP12.18□□□□□ -0.46
SPIN3-230ENST00000639888 PDE4DQ08499 809 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 RCN2Q14257 317 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 TNNI3KQ59H18 835 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 PEX26Q7Z412 305 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 ARL10Q8N8L6 244 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 NAF1Q96HR8 494 aaKnown RBP12.18□□□□□ -0.46
SPIN3-230ENST00000639888 AP1M1Q9BXS5 423 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 EHD2Q9NZN4 543 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 VPS54Q9P1Q0 977 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 CTTNBP2NLQ9P2B4 639 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 FPGT-TNNI3KV9GXZ4 949 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 TULP4Q9NRJ4 1543 aa12.18□□□□□ -0.46
SPIN3-230ENST00000639888 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms