RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CREB3L3Q68CJ9 461 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 FBXO38Q6PIJ6 1188 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 EPS8L3Q8TE67 593 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 SCG3Q8WXD2 468 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 CLIP3Q96DZ5 547 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 SKAP2O75563 359 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 HOXD12P35452 270 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 CHKAP35790 457 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 FBXW10Q5XX13 1052 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 GPIHBP1Q8IV16 184 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PALM2Q8IXS6 379 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 CKAP2LQ8IYA6 745 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PPFIBP2Q8ND30 876 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 IFT81Q8WYA0 676 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 COG3Q96JB2 828 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ANTXR1Q9H6X2 564 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 DDX21Q9NR30 783 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 GNAT1P11488 350 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 MXRA7P84157 204 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC116Q8IYX3 515 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 VCXQ9H320 206 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ZEB2O60315 1214 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 SLU7O95391 586 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 POLA2Q14181 598 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TCERG1LQ5VWI1 586 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 STX12Q86Y82 276 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 RSAD2Q8WXG1 361 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 DPF3Q92784 378 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 NELL1Q92832 810 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PGBD4Q96DM1 585 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 NLRP4Q96MN2 994 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PPP1R14DQ9NXH3 145 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TTLL13PA6NNM8 815 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 ECE1P42892 770 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 TMED10P49755 219 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PRKG1Q13976 671 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CDCA2Q69YH5 1023 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 SWSAP1Q6NVH7 229 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 SRGAP1Q7Z6B7 1085 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 ENAHQ8N8S7 591 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 SNF8Q96H20 258 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PIF1Q9H611 641 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 EXOC7Q9UPT5 735 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PHF24Q9UPV7 400 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 MYO18AQ92614 2054 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 XPOTO43592 962 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 ACTN4O43707 911 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 RNF40O75150 1001 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 MAPKAPK2P49137 400 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PPFIA1Q13136 1202 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 RC3H1Q5TC82 1133 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CAPN12Q6ZSI9 719 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 GATAD2AQ86YP4 633 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 NPAS4Q8IUM7 802 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 HOMER2Q9NSB8 354 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 GNAT3A8MTJ3 354 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 GOLGA8MH3BSY2 632 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 HOXD11P31277 338 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CTAG1AP78358 180 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 MAPRE2Q15555 327 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 BTNL9Q6UXG8 535 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 ARHGAP18Q8N392 663 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 TRPC4APQ8TEL6 797 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 RUFY2Q8WXA3 655 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 LPIN2Q92539 896 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CEP95Q96GE4 821 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 YIPF3Q9GZM5 350 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CAPN7Q9Y6W3 813 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 MYPNQ86TC9 1320 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 BAG2O95816 211 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PAK2Q13177 524 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 TRIM22Q8IYM9 498 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 TSEN34Q9BSV6 310 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 SLC5A4Q9NY91 659 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 MAPK8IP1Q9UQF2 711 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 GOLGA8IPA6NC78 632 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 BTBD11A6QL63 1104 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PER1O15534 1290 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 TIPRLO75663 272 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 GABREP78334 506 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 KLC1Q07866 573 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 TTLL12Q14166 644 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 NUTM2DQ5VT03 806 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 HIBCHQ6NVY1 386 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 FAM149B1Q96BN6 582 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 NINQ8N4C6 2090 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 EME2A4GXA9 379 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PRRT4C9JH25 899 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 RAPGEF3O95398 923 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 PDHA1P08559 390 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 CASTP20810 708 aaKnown RBP4.72□□□□□ -1.65
SCN3A-209ENST00000639244 WLSQ5T9L3 541 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 RAPH1Q70E73 1250 aa4.72□□□□□ -1.65
SCN3A-209ENST00000639244 RSRC2Q7L4I2 434 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms