RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 BCORQ6W2J9 1755 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 VAMP4O75379 141 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 ADD1P35611 737 aaKnown RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 TXLNAP40222 546 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 COPS2P61201 443 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 STK3Q13188 491 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 TWISTNBQ3B726 338 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 FAM209AQ5JX71 171 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 NECAB2Q7Z6G3 386 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 ERP27Q96DN0 273 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 PDGFDQ9GZP0 370 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 MTFR1LQ9H019 292 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 RSPH9Q9H1X1 276 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 NARFQ9UHQ1 456 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 SCN7AQ01118 1682 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 PRRT4C9JH25 899 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 CDK2AP1O14519 115 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 CASP7P55210 303 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 SH3BP2P78314 561 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 EXOSC9Q06265 439 aaKnown RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 PEAR1Q5VY43 1037 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 ARMC3Q5W041 872 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 TTBK2Q6IQ55 1244 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 C1orf228Q6PIY5 440 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 ZNF280CQ8ND82 737 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 KIFC2Q96AC6 838 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 LRGUKQ96M69 825 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 ELAC2Q9BQ52 826 aaKnown RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 EIF2AK1Q9BQI3 630 aaKnown RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 SELENOOQ9BVL4 669 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 CLIC5Q9NZA1 410 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 DBF4Q9UBU7 674 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 LRP5O75197 1615 aa9.16□□□□□ -0.94
SCARB2-209ENST00000638409 USP42Q9H9J4 1324 aaKnown RBP9.16□□□□□ -0.94
SCARB2-209ENST00000638409 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 A0A1W2PQH9 124 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 CT47B1P0C2W7 299 aaPredicted RBP9.15□□□□□ -0.94
SCARB2-209ENST00000638409 RFC4P35249 363 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 RENBPP51606 427 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 SEPT7Q16181 437 aaKnown RBP9.15□□□□□ -0.94
SCARB2-209ENST00000638409 CCDC30Q5VVM6 783 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 ERICH6BQ5W0A0 696 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 LVRNQ6Q4G3 990 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 CMTR1Q8N1G2 835 aaKnown RBP9.15□□□□□ -0.94
SCARB2-209ENST00000638409 ABCB6Q9NP58 842 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 ANLNQ9NQW6 1124 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 CACNA1FO60840 1977 aa9.15□□□□□ -0.94
SCARB2-209ENST00000638409 GNRH1P01148 92 aa9.15□□□□□ -0.95
SCARB2-209ENST00000638409 EIF2S2P20042 333 aaKnown RBP9.15□□□□□ -0.95
SCARB2-209ENST00000638409 PTPN21Q16825 1174 aa9.15□□□□□ -0.95
SCARB2-209ENST00000638409 SMIM5Q71RC9 77 aa9.15□□□□□ -0.95
SCARB2-209ENST00000638409 TTC6Q86TZ1 520 aa9.15□□□□□ -0.95
SCARB2-209ENST00000638409 SKA1Q96BD8 255 aa9.15□□□□□ -0.95
SCARB2-209ENST00000638409 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.95
SCARB2-209ENST00000638409 PCDHB10Q9UN67 800 aa9.15□□□□□ -0.95
SCARB2-209ENST00000638409 DNAJC25-GNG10A0A024R161 153 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 ENC1O14682 589 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 LILRA1O75019 489 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 TEAD4Q15561 434 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 TUBB8Q3ZCM7 444 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 XKR5Q6UX68 686 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 MPP4Q96JB8 637 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 HYPKQ9NX55 129 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 ERVV-1B6SEH8 477 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 PMM2O15305 246 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 RFPL1O75677 317 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 GYS1P13807 737 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 BCAMP50895 628 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 TRIM42Q8IWZ5 723 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 KIF2CQ99661 725 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 SUCOQ9UBS9 1254 aaKnown RBP9.14□□□□□ -0.95
SCARB2-209ENST00000638409 GTF2IRD1Q9UHL9 959 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 KCNMB2Q9Y691 235 aa9.14□□□□□ -0.95
SCARB2-209ENST00000638409 E2F8A0AVK6 867 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 KLRG2A4D1S0 409 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-209ENST00000638409 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-209ENST00000638409 HIP1RO75146 1068 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 CAMTA2O94983 1202 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 RPLP1P05386 114 aaKnown RBP9.13□□□□□ -0.95
SCARB2-209ENST00000638409 SLC10A6Q3KNW5 377 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 DTHD1Q6ZMT9 781 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 AGMOQ6ZNB7 445 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 HSH2DQ96JZ2 352 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 PRR14Q9BWN1 585 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 KANSL3Q9P2N6 904 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 A0A1W2PP55 124 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 RFPL3O75679 317 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 RHOBTB3O94955 611 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 TNFAIP3P21580 790 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 ECE1P42892 770 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 IDH3AP50213 366 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 ZNF460Q14592 562 aa9.13□□□□□ -0.95
SCARB2-209ENST00000638409 SAFBQ15424 915 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms