RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 TKFCQ3LXA3 575 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 SLC30A10Q6XR72 485 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 HOMER1Q86YM7 354 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 DIS3LQ8TF46 1054 aaKnown RBP14.59□□□□□ -0.07
CLN6-225ENST00000638144 LENG1Q96BZ8 264 aaPredicted RBP14.59□□□□□ -0.07
CLN6-225ENST00000638144 TMEM87BQ96K49 555 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 TINF2Q9BSI4 451 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 PTPDC1A2A3K4 754 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 PPP1R11O60927 126 aaPredicted RBP14.58□□□□□ -0.08
CLN6-225ENST00000638144 PLEKHA8P1O95397 391 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 EXOSC10Q01780 885 aaKnown RBP14.58□□□□□ -0.08
CLN6-225ENST00000638144 TSGA10IPQ3SY00 556 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLN6-225ENST00000638144 MICU3Q86XE3 530 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 CMTR1Q8N1G2 835 aaKnown RBP14.58□□□□□ -0.08
CLN6-225ENST00000638144 CLEC4DQ8WXI8 215 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 KCNB2Q92953 911 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 ASTN1O14525 1302 aa14.58□□□□□ -0.08
CLN6-225ENST00000638144 SOWAHBA6NEL2 793 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 CYTH3O43739 400 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 DDAH1O94760 285 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 FARP2O94887 1054 aaPredicted RBP14.57□□□□□ -0.08
CLN6-225ENST00000638144 CALML3P27482 149 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 BAATQ14032 418 aaPredicted RBP14.57□□□□□ -0.08
CLN6-225ENST00000638144 KRT32Q14532 448 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
CLN6-225ENST00000638144 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 PIGSQ96S52 555 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 USP26Q9BXU7 913 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 CRISPLD2Q9H0B8 497 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 CYP39A1Q9NYL5 469 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
CLN6-225ENST00000638144 SNAI1O95863 264 aaPredicted RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 CASTP20810 708 aaKnown RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 LHX8Q68G74 356 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 ARMCX2Q7L311 632 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 FBXO11Q86XK2 927 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 CTCFLQ8NI51 663 aaPredicted RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 DIS3Q9Y2L1 958 aaKnown RBP14.56□□□□□ -0.08
CLN6-225ENST00000638144 SLC12A7Q9Y666 1083 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 PFASO15067 1338 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
CLN6-225ENST00000638144 ALPK3Q96L96 1907 aa14.55□□□□□ -0.08
CLN6-225ENST00000638144 hCG_1642624A0A1W2PR95 340 aa14.55□□□□□ -0.08
CLN6-225ENST00000638144 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
CLN6-225ENST00000638144 LIFRP42702 1097 aa14.55□□□□□ -0.08
CLN6-225ENST00000638144 BLOC1S2Q6QNY1 142 aa14.55□□□□□ -0.08
CLN6-225ENST00000638144 Q6ZUG5 572 aa14.55□□□□□ -0.08
CLN6-225ENST00000638144 MTA3Q9BTC8 594 aa14.55□□□□□ -0.08
CLN6-225ENST00000638144 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.55□□□□□ -0.08
CLN6-225ENST00000638144 KLF18A0A0U1RQI7 1052 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 ZBTB5O15062 677 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 SEC24BO95487 1268 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 ZNF865P0CJ78 1059 aaPredicted RBP14.54□□□□□ -0.08
CLN6-225ENST00000638144 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
CLN6-225ENST00000638144 RPS6P62753 249 aaKnown RBP14.54□□□□□ -0.08
CLN6-225ENST00000638144 FGD1P98174 961 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 APOA5Q6Q788 366 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 RNF207Q6ZRF8 634 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 EEPD1Q7L9B9 569 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 SGMS1Q86VZ5 419 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 CCDC82Q8N4S0 544 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
CLN6-225ENST00000638144 MTMR8Q96EF0 704 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 PAWRQ96IZ0 340 aaKnown RBP14.54□□□□□ -0.08
CLN6-225ENST00000638144 UPF3BQ9BZI7 483 aaKnown RBP14.54□□□□□ -0.08
CLN6-225ENST00000638144 RIOX1Q9H6W3 641 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 CNPY2Q9Y2B0 182 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 ABCB11O95342 1321 aa14.54□□□□□ -0.08
CLN6-225ENST00000638144 SYNGAP1Q96PV0 1343 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 OPLAHO14841 1288 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 SEPT4O43236 478 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 ADCY6O43306 1168 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 PTGS1P23219 599 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 RPS6KB1P23443 525 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 KIF5BP33176 963 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 MAMDC4Q6UXC1 1216 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 UBE2Q1Q7Z7E8 422 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 TMTC2Q8N394 836 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 BRF1Q92994 677 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
CLN6-225ENST00000638144 AMNQ9BXJ7 453 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 COL20A1Q9P218 1284 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 OGDHLQ9ULD0 1010 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 PCDHA1Q9Y5I3 950 aa14.53□□□□□ -0.08
CLN6-225ENST00000638144 GOLGA8AA7E2F4 631 aa14.52□□□□□ -0.09
CLN6-225ENST00000638144 GOLGA8BA8MQT2 603 aa14.52□□□□□ -0.09
CLN6-225ENST00000638144 HMGB1P09429 215 aaKnown RBP14.52□□□□□ -0.09
CLN6-225ENST00000638144 ALDH5A1P51649 535 aaPredicted RBP14.52□□□□□ -0.09
CLN6-225ENST00000638144 GJC2Q5T442 439 aaPredicted RBP14.52□□□□□ -0.09
CLN6-225ENST00000638144 TMTC3Q6ZXV5 915 aa14.52□□□□□ -0.09
CLN6-225ENST00000638144 ZNF467Q7Z7K2 595 aaPredicted RBP14.52□□□□□ -0.09
CLN6-225ENST00000638144 FBXO16Q8IX29 292 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms