RNA–Protein interactions for RNA: ENST00000637722.1

ARID1B-228, Transcript of AT-rich interaction domain 1B, humanhuman

Gene ARID1B, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-228ENST00000637722 DDX60Q8IY21 1712 aaKnown RBP7.43□□□□□ -1.22
ARID1B-228ENST00000637722 MYH14Q7Z406 1995 aaKnown RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L15C9J2P7 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L13C9JLJ4 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L11C9JVI0 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L18D6R9N7 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L22D6RA61 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L17D6RBQ6 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L19D6RCP7 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L20D6RJB6 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L24Q0WX57 530 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 PAK1Q13153 545 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 LONRF3Q496Y0 759 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 HERC4Q5GLZ8 1057 aaPredicted RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ANGEL2Q5VTE6 544 aaKnown RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ARHGEF16Q5VV41 709 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 USP17L6PQ6QN14 398 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ARMC9Q7Z3E5 817 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 KRT26Q7Z3Y9 468 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 PRPF38AQ8NAV1 312 aaKnown RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SMCR8Q8TEV9 937 aaPredicted RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 CUEDC2Q9H467 287 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 MAD2L2Q9UI95 211 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 CTNND2Q9UQB3 1225 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 BTAF1O14981 1849 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SPEF2Q9C093 1822 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 C4BP0C0L5 1744 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 UBE2Q2LH0YL09 131 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 VIL1P09327 827 aaKnown RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 FMR1NBQ8N0W7 255 aaPredicted RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ANKRD35Q8N283 1001 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ZNF830Q96NB3 372 aaPredicted RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 GSDMAQ96QA5 445 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SCAF8Q9UPN6 1271 aaKnown RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SYNRGQ9UMZ2 1314 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 TESPA1A2RU30 521 aaPredicted RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ARHGEF35A5YM69 484 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 DKC1O60832 514 aaKnown RBP eCLIP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SHMT1P34896 483 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 FANCCQ00597 558 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 RASSF7Q02833 373 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SYCP1Q15431 976 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 NBPF9Q3BBW0 867 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 HS2ST1Q7LGA3 356 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 NLRX1Q86UT6 975 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 FAM83AQ86UY5 434 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ANKS1AQ92625 1134 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 SLF1Q9BQI6 1058 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 MAGEF1Q9HAY2 307 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 FAM217BQ9NTX9 383 aaPredicted RBP7.42□□□□□ -1.22
ARID1B-228ENST00000637722 CASZ1Q86V15 1759 aa7.42□□□□□ -1.22
ARID1B-228ENST00000637722 ZSCAN12O43309 604 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 HOXA13P31271 388 aaPredicted RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 UBXN2AP68543 259 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 GRM1Q13255 1194 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 TPH2Q8IWU9 490 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 PDGFDQ9GZP0 370 aaPredicted RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 GOLPH3LQ9H4A5 285 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 VCPKMTQ9H867 229 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 GGA3Q9NZ52 723 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 FAM205CA6NFA0 338 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 STXBP3O00186 592 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ZNF75DP51815 510 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 GNPTABQ3T906 1256 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 MNS1Q8NEH6 495 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 TMEM260Q9NX78 707 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ZKSCAN5Q9Y2L8 839 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 RABGAP1Q9Y3P9 1069 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 TRAF5O00463 557 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 TRIM21P19474 475 aaKnown RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 CETN1Q12798 172 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ORC2Q13416 577 aaPredicted RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 SPDYE2Q495Y8 402 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ARHGAP29Q52LW3 1261 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 TRMT44Q8IYL2 757 aaKnown RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 TXLNBQ8N3L3 684 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 CSGALNACT2Q8N6G5 542 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ZMYND12Q9H0C1 365 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 JMJD4Q9H9V9 463 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 RIC8AQ9NPQ8 531 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 WNT10BO00744 389 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 RPN1P04843 607 aaKnown RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 FGRP09769 529 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 SKILP12757 684 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ATP2C1P98194 919 aaPredicted RBP7.41□□□□□ -1.22
ARID1B-228ENST00000637722 RAD51AP2Q09MP3 1159 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 DPCR1Q3MIW9 517 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 LRCH2Q5VUJ6 765 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 SHC4Q6S5L8 630 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 MIER3Q7Z3K6 550 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ZFPM1Q8IX07 1006 aa7.41□□□□□ -1.22
ARID1B-228ENST00000637722 ZNF384Q8TF68 577 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms