RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 LENG1Q96BZ8 264 aaPredicted RBP22.21■■□□□ 1.15
CLN6-221ENST00000637494 MPHOSPH6Q99547 160 aaKnown RBP22.21■■□□□ 1.15
CLN6-221ENST00000637494 PRDM5Q9NQX1 630 aaPredicted RBP22.21■■□□□ 1.15
CLN6-221ENST00000637494 ZSWIM5Q9P217 1185 aa22.21■■□□□ 1.15
CLN6-221ENST00000637494 A0A1W2PQ45 241 aaPredicted RBP22.2■■□□□ 1.14
CLN6-221ENST00000637494 A0A1W2PQY0 241 aa22.2■■□□□ 1.14
CLN6-221ENST00000637494 PTPDC1A2A3K4 754 aa22.2■■□□□ 1.14
CLN6-221ENST00000637494 SNX17Q15036 470 aa22.2■■□□□ 1.14
CLN6-221ENST00000637494 STARD7Q9NQZ5 370 aa22.2■■□□□ 1.14
CLN6-221ENST00000637494 U3KPZ7 1027 aaPredicted RBP22.2■■□□□ 1.14
CLN6-221ENST00000637494 SMCHD1A6NHR9 2005 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 SOWAHBA6NEL2 793 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 CHMLP26374 656 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 ACLYP53396 1101 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 TNFAIP2Q03169 654 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 ANKS1AQ92625 1134 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 TNKSO95271 1327 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 WDR19Q8NEZ3 1342 aa22.19■■□□□ 1.14
CLN6-221ENST00000637494 GOLGA8HP0CJ92 632 aa22.18■■□□□ 1.14
CLN6-221ENST00000637494 BAATQ14032 418 aaPredicted RBP22.18■■□□□ 1.14
CLN6-221ENST00000637494 KCNA10Q16322 511 aa22.18■■□□□ 1.14
CLN6-221ENST00000637494 ASPRV1Q53RT3 343 aa22.18■■□□□ 1.14
CLN6-221ENST00000637494 IFIT1BQ5T764 474 aaKnown RBP22.18■■□□□ 1.14
CLN6-221ENST00000637494 ENAHQ8N8S7 591 aaPredicted RBP22.18■■□□□ 1.14
CLN6-221ENST00000637494 KLHDC9Q8NEP7 349 aa22.18■■□□□ 1.14
CLN6-221ENST00000637494 VTI1AQ96AJ9 217 aa22.18■■□□□ 1.14
CLN6-221ENST00000637494 GLT1D1Q96MS3 346 aa22.18■■□□□ 1.14
CLN6-221ENST00000637494 TRIOBPQ9H2D6 2365 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 LOC102724159A0A0B4J2E5 919 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 B4DLN1 442 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 DHX16O60231 1041 aaKnown RBP22.17■■□□□ 1.14
CLN6-221ENST00000637494 CST5P28325 142 aaPredicted RBP22.17■■□□□ 1.14
CLN6-221ENST00000637494 MRPL12P52815 198 aaKnown RBP22.17■■□□□ 1.14
CLN6-221ENST00000637494 GJA9P57773 515 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 TLE2Q04725 743 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 PWP2Q15269 919 aaKnown RBP22.17■■□□□ 1.14
CLN6-221ENST00000637494 GNASQ5JWF2 1037 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 RNF207Q6ZRF8 634 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 AP5M1Q9H0R1 490 aa22.17■■□□□ 1.14
CLN6-221ENST00000637494 UPF3AQ9H1J1 476 aaKnown RBP22.17■■□□□ 1.14
CLN6-221ENST00000637494 ERICH2A1L162 156 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 DCDC2CA8MYV0 355 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 NFIBO00712 420 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 PARP1P09874 1014 aaKnown RBP22.16■■□□□ 1.14
CLN6-221ENST00000637494 CALML3P27482 149 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 IQSEC1Q6DN90 963 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 RALYLQ86SE5 291 aaKnown RBP22.16■■□□□ 1.14
CLN6-221ENST00000637494 UBA5Q9GZZ9 404 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 IL25Q9H293 177 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 VTA1Q9NP79 307 aa22.16■■□□□ 1.14
CLN6-221ENST00000637494 ELP1O95163 1332 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 MROH7Q68CQ1 1323 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 ZEB2O60315 1214 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 PQBP1O60828 265 aaKnown RBP22.15■■□□□ 1.14
CLN6-221ENST00000637494 ASGR1P07306 291 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 CLTBP09497 229 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 LRIT3Q3SXY7 679 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 USH1GQ495M9 461 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 KATNBL1Q9H079 304 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 PDLIM7Q9NR12 457 aa22.15■■□□□ 1.14
CLN6-221ENST00000637494 ALDH5A1P51649 535 aaPredicted RBP22.14■■□□□ 1.13
CLN6-221ENST00000637494 SART3Q15020 963 aaKnown RBP22.14■■□□□ 1.13
CLN6-221ENST00000637494 CDC37Q16543 378 aaPredicted RBP22.14■■□□□ 1.13
CLN6-221ENST00000637494 KIAA1211Q6ZU35 1233 aa22.14■■□□□ 1.13
CLN6-221ENST00000637494 EEPD1Q7L9B9 569 aa22.14■■□□□ 1.13
CLN6-221ENST00000637494 MCM3APO60318 1980 aa22.14■■□□□ 1.13
CLN6-221ENST00000637494 ABCB11O95342 1321 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 MYADML2A6NDP7 307 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 SGSM2O43147 1006 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 PDE4DQ08499 809 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 CCSAPQ6IQ19 270 aaPredicted RBP22.13■■□□□ 1.13
CLN6-221ENST00000637494 TLK2Q86UE8 772 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 FBXO16Q8IX29 292 aaPredicted RBP22.13■■□□□ 1.13
CLN6-221ENST00000637494 ADGRF4Q8IZF3 695 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 MORC4Q8TE76 937 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 LRCH3Q96II8 777 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 TOX2Q96NM4 488 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 MAF1Q9H063 256 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 TMEM39AQ9NV64 488 aa22.13■■□□□ 1.13
CLN6-221ENST00000637494 A0A0U1RQG5 324 aaPredicted RBP22.12■■□□□ 1.13
CLN6-221ENST00000637494 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.12■■□□□ 1.13
CLN6-221ENST00000637494 SOX1O00570 391 aaPredicted RBP22.12■■□□□ 1.13
CLN6-221ENST00000637494 ADCY6O43306 1168 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 CYP21A2P08686 494 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 RAG1P15918 1043 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 PTH1RQ03431 593 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 GPR153Q6NV75 609 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 SLC30A10Q6XR72 485 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 RGS22Q8NE09 1264 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 DNERQ8NFT8 737 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 NCOA7Q8NI08 942 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 CLEC4DQ8WXI8 215 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 BADQ92934 168 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 Q9Y3F1 56 aa22.12■■□□□ 1.13
CLN6-221ENST00000637494 ASTN1O14525 1302 aa22.11■■□□□ 1.13
CLN6-221ENST00000637494 IFIT3O14879 490 aaKnown RBP22.11■■□□□ 1.13
CLN6-221ENST00000637494 TLR3O15455 904 aaKnown RBP22.11■■□□□ 1.13
CLN6-221ENST00000637494 DYNC1LI2O43237 492 aaPredicted RBP22.11■■□□□ 1.13
CLN6-221ENST00000637494 CABYRO75952 493 aa22.11■■□□□ 1.13
CLN6-221ENST00000637494 RPS6P62753 249 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms