RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 NID2Q14112 1375 aa9.87□□□□□ -0.83
CDKL5-209ENST00000635828 PABPC4Q13310 644 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDKL5-209ENST00000635828 PKP1Q13835 747 aa9.87□□□□□ -0.83
CDKL5-209ENST00000635828 FAM160B2Q86V87 743 aa9.87□□□□□ -0.83
CDKL5-209ENST00000635828 RNF146Q9NTX7 359 aa9.87□□□□□ -0.83
CDKL5-209ENST00000635828 TMEM260Q9NX78 707 aa9.87□□□□□ -0.83
CDKL5-209ENST00000635828 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
CDKL5-209ENST00000635828 CPLX1O14810 134 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 ZBED4O75132 1171 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CALM1P0DP23 149 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CALM2P0DP24 149 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CALM3P0DP25 149 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 IFNAR1P17181 557 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 ANKRD1Q15327 319 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 NSMFQ6X4W1 530 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 TEX13BQ9BXU2 312 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 A1CFQ9NQ94 594 aaKnown RBP9.86□□□□□ -0.83
CDKL5-209ENST00000635828 MORF4L1Q9UBU8 362 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 STXBP3O00186 592 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 PLA2G6O60733 806 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
CDKL5-209ENST00000635828 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 FBXO11Q86XK2 927 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 NPLOC4Q8TAT6 608 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CHAMP1Q96JM3 812 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 MAP3K14Q99558 947 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 PNMA6FA0A0J9YX94 578 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-209ENST00000635828 ALDH1A1P00352 501 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CFBP00751 764 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 ELNP15502 786 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CYP2B6P20813 491 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 NPY5RQ15761 445 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 RRP36Q96EU6 259 aaKnown RBP9.86□□□□□ -0.83
CDKL5-209ENST00000635828 FGD4Q96M96 766 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 PLXNA1Q9UIW2 1896 aa9.86□□□□□ -0.83
CDKL5-209ENST00000635828 CALML3P27482 149 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 ADORA2AP29274 412 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 RBM28Q9NW13 759 aaKnown RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 ORC3Q9UBD5 711 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 SZT2Q5T011 3432 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 K7ELQ4 463 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 NT5C2P49902 561 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 RPS6P62753 249 aaKnown RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 BAATQ14032 418 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 RIOX2Q8IUF8 465 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 GJD2Q9UKL4 321 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 GCLCP48506 637 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 PFKFB3Q16875 520 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 PRAMEF19Q5SWL8 479 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 TRIM17Q9Y577 477 aa9.85□□□□□ -0.83
CDKL5-209ENST00000635828 CTDP1Q9Y5B0 961 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-209ENST00000635828 WNT7AO00755 349 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 MEIS2O14770 477 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 TNPO2O14787 897 aaKnown RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SCG2P13521 617 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 GJB2P29033 226 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 FLT3LGP49771 235 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 EEPD1Q7L9B9 569 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 FCHSD1Q86WN1 690 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 IL31RAQ8NI17 732 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 FOXD4L4Q8WXT5 416 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 AMNQ9BXJ7 453 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 CFHR5Q9BXR6 569 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 ZCCHC17Q9NP64 241 aaKnown RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 PRPF3O43395 683 aaKnown RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 NR5A1Q13285 461 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 OTOP1Q7RTM1 612 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SMARCC2Q8TAQ2 1214 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SAGE1Q9NXZ1 904 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 CYP39A1Q9NYL5 469 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 PCDH10Q9P2E7 1040 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 BIN2Q9UBW5 565 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 MYPNQ86TC9 1320 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 ATP2A1O14983 1001 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 IRX5P78411 483 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 COL13A1Q5TAT6 717 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 ANKRD35Q8N283 1001 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SH3TC2Q8TF17 1288 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 TAAR1Q96RJ0 339 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 BARHL2Q9NY43 387 aa9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SEC63Q9UGP8 760 aaKnown RBP9.84□□□□□ -0.83
CDKL5-209ENST00000635828 SOWAHBA6NEL2 793 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 FKTNO75072 461 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 NAPAP54920 295 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 EDIL3O43854 480 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 CCAR1Q8IX12 1150 aaKnown RBP9.83□□□□□ -0.84
CDKL5-209ENST00000635828 LENG1Q96BZ8 264 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-209ENST00000635828 ALG1Q9BT22 464 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 RNF26Q9BY78 433 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-209ENST00000635828 BCAS3Q9H6U6 928 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 PTCH2Q9Y6C5 1203 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 DOCK5Q9H7D0 1870 aa9.83□□□□□ -0.84
CDKL5-209ENST00000635828 SMCO2A6NFE2 343 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms