RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 MYO1EQ12965 1108 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 WHAMMP3Q1A5X7 153 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 CERKLQ49MI3 558 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ARMCX5Q6P1M9 558 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 MCUQ8NE86 351 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 NELFBQ8WX92 580 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 CABS1Q96KC9 395 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 IFIH1Q9BYX4 1025 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SYTL2Q9HCH5 934 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 HOMER3Q9NSC5 361 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 KRT87PA6NCN2 255 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 NEMP1O14524 444 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 DLATP10515 647 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 Q3C1V9 767 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 TMTC1Q8IUR5 882 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 THEM5Q8N1Q8 247 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 TEKT4Q8WW24 435 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 COG4Q9H9E3 785 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 KRT82Q9NSB4 513 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 FAM83GA6ND36 823 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PAMP19021 973 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ARL13BQ3SXY8 428 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PPP1R2P3Q6NXS1 205 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 FAM178BQ8IXR5 827 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 RAB42Q8N4Z0 105 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 LRRC37BQ96QE4 947 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 YTHDC2Q9H6S0 1430 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ZKSCAN5Q9Y2L8 839 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PCDHB4Q9Y5E5 795 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SOS1Q07889 1333 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SGK1O00141 431 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SORBS3O60504 671 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 GNAT1P11488 350 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ATF2P15336 505 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 HOXD10P28358 340 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ESRRGP62508 458 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 HSP90AA5PQ58FG0 334 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 DNAAF3Q8N9W5 541 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 EPAS1Q99814 870 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 LSM14BQ9BX40 385 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PSTPIP2Q9H939 334 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 LRRC4Q9HBW1 653 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ARPP21Q9UBL0 812 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PNMA3Q9UL41 463 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PCDHA12Q9UN75 941 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 MAGI1Q96QZ7 1491 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PDE1BQ01064 536 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 GPBP1Q86WP2 473 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 YAF2Q8IY57 180 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 MLKLQ8NB16 471 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 CDC26Q8NHZ8 85 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 DHX38Q92620 1227 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 PPP2R3CQ969Q6 453 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ABHD8Q96I13 439 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 NUDCD1Q96RS6 583 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM15Q9C019 465 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SCAF11Q99590 1463 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 SRGAP2CP0DJJ0 459 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 MAGEA1P43355 309 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 USP14P54578 494 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 GRIN1Q05586 938 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 POSTNQ15063 836 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 GIPC2Q8TF65 315 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ALKBH8Q96BT7 664 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 GSDMAQ96QA5 445 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 ZC4H2Q9NQZ6 224 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 LARSQ9P2J5 1176 aaKnown RBP6.05□□□□□ -1.44
SCN1A-209ENST00000635750 UBXN8O00124 270 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 CCND2P30279 289 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 KRT71Q3SY84 523 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 RFX6Q8HWS3 928 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 NELFCDQ8IXH7 590 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ZNF526Q8TF50 670 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 LPIN2Q92539 896 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 CNKSR1Q969H4 720 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 GDAP1L1Q96MZ0 367 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 PANK4Q9NVE7 773 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 FAF1Q9UNN5 650 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 RUSC2Q8N2Y8 1516 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 GTPBP10A4D1E9 387 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 H3BRJ5 948 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 PTK2Q05397 1052 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ARMCX2Q7L311 632 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM59Q8IWR1 403 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 URGCPQ8TCY9 931 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 PAWRQ96IZ0 340 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TRPM2O94759 1503 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TCP10L2B9ZVM9 353 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ANO1Q5XXA6 986 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 RNF207Q6ZRF8 634 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 FBXO11Q86XK2 927 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 C2CD5Q86YS7 1000 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD42Q8N9B4 389 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 PLBD2Q8NHP8 589 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 CABLES1Q8TDN4 633 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 U2AF1L4Q8WU68 220 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM11Q96F44 468 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms