RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 GPATCH4Q5T3I0 446 aaKnown RBP8.1□□□□□ -1.11
BRCA1-230ENST00000634433 NT5DC1Q5TFE4 455 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 METTL16Q86W50 562 aaKnown RBP8.1□□□□□ -1.11
BRCA1-230ENST00000634433 NPAS4Q8IUM7 802 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 KIAA0825Q8IV33 1275 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 MLKLQ8NB16 471 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SPC24Q8NBT2 197 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 ERCC4Q92889 916 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-230ENST00000634433 MXD3Q9BW11 206 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 ZMYND12Q9H0C1 365 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 RIOX1Q9H6W3 641 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 ESYT2A0FGR8 921 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 FAM205CA6NFA0 338 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 CBFA2T2O43439 604 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 CYTH3O43739 400 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 OFD1O75665 1012 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SLC34A2O95436 690 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SNHG28P0DPA3 235 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 PDHBP11177 359 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 AKR1B1P15121 316 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 ABL2P42684 1182 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 CCDC93Q567U6 631 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 IQUBQ8NA54 791 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 GPKOWQ92917 476 aaPredicted RBP eCLIP8.1□□□□□ -1.11
BRCA1-230ENST00000634433 KLF15Q9UIH9 416 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 PCDHA6Q9UN73 950 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 PCDHA8Q9Y5H6 950 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 PCDHA5Q9Y5H7 936 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SMCO2A6NFE2 343 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 M0R2N6 131 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 ACTN4O43707 911 aaKnown RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 ENTPD3O75355 529 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 GOLGA8HP0CJ92 632 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 ERCC3P19447 782 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 MCM7P33993 719 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 SHMT1P34896 483 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 MYL5Q02045 173 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 GRIN1Q05586 938 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 AOC3Q16853 763 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 SDE2Q6IQ49 451 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 PPP1R18Q6NYC8 613 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 JAZF1Q86VZ6 243 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 SYMPKQ92797 1274 aaKnown RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 BAZ2BQ9UIF8 2168 aaKnown RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 TLDC2A0PJX2 215 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 VWA3AA6NCI4 1184 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 MPHOSPH10O00566 681 aaKnown RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 VEGFAP15692 232 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 PRPHP41219 470 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 TBX4P57082 545 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 NONOQ15233 471 aaKnown RBP eCLIP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 CERKLQ49MI3 558 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 DTHD1Q6ZMT9 781 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 RAVER1Q8IY67 606 aaKnown RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 TANGO6Q9C0B7 1094 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 GLT8D2Q9H1C3 349 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 TTC12Q9H892 705 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 KANSL2Q9H9L4 492 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 TMOD2Q9NZR1 351 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 IMPACTQ9P2X3 320 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 HDAC9Q9UKV0 1011 aa8.09□□□□□ -1.11
BRCA1-230ENST00000634433 CTDP1Q9Y5B0 961 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-230ENST00000634433 SLX4Q8IY92 1834 aa8.09□□□□□ -1.12
BRCA1-230ENST00000634433 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 ERCC5P28715 1186 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-230ENST00000634433 GSDMDP57764 484 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 TGFB2P61812 414 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF543Q08ER8 600 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 ZSCAN29Q8IWY8 852 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-230ENST00000634433 TNS4Q8IZW8 715 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 PDILTQ8N807 584 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 MKL1Q969V6 931 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 DHX58Q96C10 678 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 KCNQ5Q9NR82 932 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 NYAP2Q9P242 653 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 MAN1B1Q9UKM7 699 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
BRCA1-230ENST00000634433 HOXA2O43364 376 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 C21orf2O43822 256 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 NFIAQ12857 509 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 MORC3Q14149 939 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 SLC35G1Q2M3R5 365 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF280DQ6N043 979 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 SH3RF1Q7Z6J0 888 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 HOMER1Q86YM7 354 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 C4orf32Q8N8J7 132 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 SPATA20Q8TB22 786 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 EPSTI1Q96J88 318 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms