RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 PPP4R2Q9NY27 417 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 MTMR7Q9Y216 660 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 GRXCR1A8MXD5 290 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 FDX1P10109 184 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 ALAS1P13196 640 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 PPARAQ07869 468 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 NMIQ13287 307 aaPredicted RBP18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 TMEM240Q5SV17 173 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 CCDC174Q6PII3 467 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 KCTD1Q719H9 257 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 C16orf59Q7L2K0 433 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 STAG1Q8WVM7 1258 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 TIFAQ96CG3 184 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 RNF146Q9NTX7 359 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 SYNPO2Q9UMS6 1093 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
SNRNP48-203ENST00000634363 A0A0D9SFI3 127 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 SOWAHBA6NEL2 793 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 MCMDC2Q4G0Z9 681 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 CXCL17Q6UXB2 119 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 EEPD1Q7L9B9 569 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 PPM1EQ8WY54 764 aa18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
SNRNP48-203ENST00000634363 ASB14A6NK59 587 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 CYP2C18P33260 490 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 PBX2P40425 430 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 MFAP1P55081 439 aaKnown RBP18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 FAM126BQ8IXS8 530 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 KATNBL1Q9H079 304 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 AP5M1Q9H0R1 490 aa18.35■□□□□ 0.53
SNRNP48-203ENST00000634363 ZNF536O15090 1300 aa18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 CTAGE5O15320 804 aa18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 DYNC1LI2O43237 492 aaPredicted RBP18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 NMT2O60551 498 aa18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 PTGS1P23219 599 aa18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 RCSD1Q6JBY9 416 aa18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
SNRNP48-203ENST00000634363 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
SNRNP48-203ENST00000634363 CCDC171Q6TFL3 1326 aa18.33■□□□□ 0.53
SNRNP48-203ENST00000634363 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 TLK2Q86UE8 772 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 USP38Q8NB14 1042 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 PBX4Q9BYU1 374 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 PDGFCQ9NRA1 345 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.52
SNRNP48-203ENST00000634363 ASTN1O14525 1302 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 RANBP6O60518 1105 aaKnown RBP18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 CD4P01730 458 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 SMPD1P17405 629 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 ITGA7Q13683 1181 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 FSCN1Q16658 493 aaKnown RBP18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 CCDC96Q2M329 555 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 PPP4R3BQ5MIZ7 849 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 PSRC1Q6PGN9 363 aaPredicted RBP18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 RASGRP2Q7LDG7 609 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 HIPK3Q9H422 1215 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 PRDM12Q9H4Q4 367 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 IL17RBQ9NRM6 502 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 CCPG1Q9ULG6 757 aa18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
SNRNP48-203ENST00000634363 EYSQ5T1H1 3165 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 ZEB2O60315 1214 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 CABYRO75952 493 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 FGBP02675 491 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 CCL23P55773 120 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 TMEM63BQ5T3F8 832 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 IQSEC1Q6DN90 963 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 OTOP2Q7RTS6 562 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 SKAP1Q86WV1 359 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 FBXO16Q8IX29 292 aaPredicted RBP18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 IL23AQ9NPF7 189 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 PRDM6Q9NQX0 595 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 MYO9BQ13459 2157 aa18.31■□□□□ 0.52
SNRNP48-203ENST00000634363 UMODL1Q5DID0 1318 aa18.3■□□□□ 0.52
SNRNP48-203ENST00000634363 PSMC6P62333 389 aa18.3■□□□□ 0.52
SNRNP48-203ENST00000634363 NKX3-2P78367 333 aa18.3■□□□□ 0.52
SNRNP48-203ENST00000634363 VPS53Q5VIR6 699 aa18.3■□□□□ 0.52
SNRNP48-203ENST00000634363 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms