RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 TRERF1Q96PN7 1200 aa19.24■□□□□ 0.67
CDC42EP4-209ENST00000630622 HOMER2Q9NSB8 354 aa19.24■□□□□ 0.67
CDC42EP4-209ENST00000630622 RNF146Q9NTX7 359 aa19.24■□□□□ 0.67
CDC42EP4-209ENST00000630622 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
CDC42EP4-209ENST00000630622 ABCB11O95342 1321 aa19.24■□□□□ 0.67
CDC42EP4-209ENST00000630622 PSMC4P43686 418 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 LBX1P52954 281 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 FCGRTP55899 365 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 SSRP1Q08945 709 aaKnown RBP19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 KIF22Q14807 665 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 PFKFB3Q16875 520 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 GPR142Q7Z601 462 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 PCDHA1Q9Y5I3 950 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
CDC42EP4-209ENST00000630622 JAK2O60674 1132 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 ECM2O94769 699 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 SCG2P13521 617 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 TRAF1Q13077 416 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 WWC2Q6AWC2 1192 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 PLEKHH3Q7Z736 793 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 TRIM22Q8IYM9 498 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 COA7Q96BR5 231 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 LLPHQ9BRT6 129 aaKnown RBP19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 ACAD9Q9H845 621 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 FBXO40Q9UH90 709 aa19.22■□□□□ 0.67
CDC42EP4-209ENST00000630622 PTPDC1A2A3K4 754 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 NFIBO00712 420 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 OPLAHO14841 1288 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 PTPREP23469 700 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 CUL4AQ13619 759 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 WDR78Q5VTH9 848 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 HEATR3Q7Z4Q2 680 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 SMARCC2Q8TAQ2 1214 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 GPKOWQ92917 476 aaPredicted RBP eCLIP19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 MRPL11Q9Y3B7 192 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 LCTP09848 1927 aa19.21■□□□□ 0.67
CDC42EP4-209ENST00000630622 STXBP3O00186 592 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 TNPO2O14787 897 aaKnown RBP19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 STRNO43815 780 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 DEXIO95424 95 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 GRB14Q14449 540 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 MORN1Q5T089 497 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 TYW1BQ6NUM6 668 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 ABRAQ8N0Z2 381 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 SHISA4Q96DD7 197 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 BARHL2Q9NY43 387 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 GJD2Q9UKL4 321 aa19.2■□□□□ 0.66
CDC42EP4-209ENST00000630622 SLC15A5A6NIM6 579 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 hCG_1984214I3L0E3 225 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 FCER1AP12319 257 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 ZNF713Q8N859 430 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 RGS22Q8NE09 1264 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 USP6NLQ92738 828 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 AIFM3Q96NN9 605 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 MMP19Q99542 508 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 A1CFQ9NQ94 594 aaKnown RBP19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 IVNS1ABPQ9Y6Y0 642 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 PLXNA1Q9UIW2 1896 aa19.19■□□□□ 0.66
CDC42EP4-209ENST00000630622 DNAJC25-GNG10A0A024R161 153 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 GNRH1P01148 92 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 GHRHRQ02643 423 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 PPP1R18Q6NYC8 613 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 TBC1D5Q92609 795 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 DDX11Q96FC9 970 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 CWC22Q9HCG8 908 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 GABRQQ9UN88 632 aa19.18■□□□□ 0.66
CDC42EP4-209ENST00000630622 ADORA2AP29274 412 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 KCTD2Q14681 263 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 ARHGEF6Q15052 776 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 OTOP1Q7RTM1 612 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 SOCS4Q8WXH5 440 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 MAF1Q9H063 256 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 CYP39A1Q9NYL5 469 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 SRRDQ9UH36 339 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 PFASO15067 1338 aa19.17■□□□□ 0.66
CDC42EP4-209ENST00000630622 COBLO75128 1261 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 HSD17B4P51659 736 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 NAPAP54920 295 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 PRKCZQ05513 592 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 BAATQ14032 418 aaPredicted RBP19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 NSMFQ6X4W1 530 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 SLC30A10Q6XR72 485 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 MCF2L2Q86YR7 1114 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 ANKRD35Q8N283 1001 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 NUDT12Q9BQG2 462 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 SH3GLB2Q9NR46 395 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 VPS54Q9P1Q0 977 aa19.16■□□□□ 0.66
CDC42EP4-209ENST00000630622 ESYT2A0FGR8 921 aa19.15■□□□□ 0.66
CDC42EP4-209ENST00000630622 PGK2P07205 417 aa19.15■□□□□ 0.66
CDC42EP4-209ENST00000630622 HOXD10P28358 340 aa19.15■□□□□ 0.66
CDC42EP4-209ENST00000630622 FLT3LGP49771 235 aa19.15■□□□□ 0.66
CDC42EP4-209ENST00000630622 RPS6P62753 249 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms