RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 POTEBQ6S5H4 581 aa14.36□□□□□ -0.11
CHD2-218ENST00000629346 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
CHD2-218ENST00000629346 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
CHD2-218ENST00000629346 PRPF38AQ8NAV1 312 aaKnown RBP14.36□□□□□ -0.11
CHD2-218ENST00000629346 KIFC2Q96AC6 838 aa14.36□□□□□ -0.11
CHD2-218ENST00000629346 EAF2Q96CJ1 260 aaPredicted RBP14.36□□□□□ -0.11
CHD2-218ENST00000629346 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
CHD2-218ENST00000629346 PDGFCQ9NRA1 345 aa14.36□□□□□ -0.11
CHD2-218ENST00000629346 H3BQ06 376 aaPredicted RBP14.35□□□□□ -0.11
CHD2-218ENST00000629346 PRKAB2O43741 272 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 ST18O60284 1047 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
CHD2-218ENST00000629346 PDE6AP16499 860 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 KCNJ6P48051 423 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 RETREG2Q8NC44 543 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 MYH8P13535 1937 aa14.35□□□□□ -0.11
CHD2-218ENST00000629346 CACNA1AO00555 2505 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 SOWAHBA6NEL2 793 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 BCAR3O75815 825 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 IQCF3P0C7M6 154 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 RFC2P35250 354 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 EP400NLQ6ZTU2 488 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 MFSD14AQ96MC6 490 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 FBXO40Q9UH90 709 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 USP34Q70CQ2 3546 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 ZNF532Q9HCE3 1301 aa14.34□□□□□ -0.11
CHD2-218ENST00000629346 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
CHD2-218ENST00000629346 MYL3P08590 195 aa14.33□□□□□ -0.12
CHD2-218ENST00000629346 POLA2Q14181 598 aa14.33□□□□□ -0.12
CHD2-218ENST00000629346 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
CHD2-218ENST00000629346 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
CHD2-218ENST00000629346 MIER1Q8N108 512 aa14.33□□□□□ -0.12
CHD2-218ENST00000629346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHD2-218ENST00000629346 CFAP54Q96N23 3096 aa14.33□□□□□ -0.12
CHD2-218ENST00000629346 ASB14A6NK59 587 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 USP17L12C9JPN9 530 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 USP17L21D6R901 530 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 F5H6K3 240 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 NDUFB10O96000 172 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
CHD2-218ENST00000629346 DEFB103AP81534 67 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 KLRC3Q07444 240 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 PUS10Q3MIT2 529 aaKnown RBP14.32□□□□□ -0.12
CHD2-218ENST00000629346 IQSEC1Q6DN90 963 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHD2-218ENST00000629346 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
CHD2-218ENST00000629346 AMOTL1Q8IY63 956 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 PRSS33Q8NF86 280 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 TGS1Q96RS0 853 aaKnown RBP14.32□□□□□ -0.12
CHD2-218ENST00000629346 SLC38A10Q9HBR0 1119 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 TNNQ9UQP3 1299 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 COG6Q9Y2V7 657 aa14.32□□□□□ -0.12
CHD2-218ENST00000629346 TRIOO75962 3097 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 BAIAP3O94812 1187 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 CHMP4BP1P59074 171 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 ERVK-21P61565 698 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 ZP2Q05996 745 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 NBPF20Q3BBV1 942 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 SLFNL1Q499Z3 407 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 IER5LQ5T953 404 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 TAPT1Q6NXT6 567 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 KIAA1211Q6ZU35 1233 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 STK11IPQ8N1F8 1099 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 CRBNQ96SW2 442 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 GPHNQ9NQX3 736 aaPredicted RBP14.31□□□□□ -0.12
CHD2-218ENST00000629346 POLR3EQ9NVU0 708 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 Q9Y3F1 56 aa14.31□□□□□ -0.12
CHD2-218ENST00000629346 ZNF318Q5VUA4 2279 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 TCRBV5S4A2TA0A5A2 114 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 RBAK-RBAKDNI3L0D1 243 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 ATP8B2P98198 1209 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 PURAQ00577 322 aaKnown RBP14.3□□□□□ -0.12
CHD2-218ENST00000629346 TTF1Q15361 905 aaPredicted RBP14.3□□□□□ -0.12
CHD2-218ENST00000629346 NEK9Q8TD19 979 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 ARHGAP45Q92619 1136 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 RAD9AQ99638 391 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD2-218ENST00000629346 ACAD9Q9H845 621 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 A1CFQ9NQ94 594 aaKnown RBP14.3□□□□□ -0.12
CHD2-218ENST00000629346 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
CHD2-218ENST00000629346 LINC01553A4QN01 128 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 MBD4O95243 580 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 IRS1P35568 1242 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 PTPN5P54829 565 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 BFSP2Q13515 415 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 AACSQ86V21 672 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
CHD2-218ENST00000629346 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
CHD2-218ENST00000629346 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
CHD2-218ENST00000629346 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 RNF146Q9NTX7 359 aa14.29□□□□□ -0.12
CHD2-218ENST00000629346 CLIP2Q9UDT6 1046 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms