RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 CYTH3O43739 400 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
CHD2-216ENST00000629104 IGHA2P01877 340 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 FGD1P98174 961 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 TRIM32Q13049 653 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 MTFR1Q15390 333 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 QRICH1Q2TAL8 776 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 ZNF792Q3KQV3 632 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 USH1GQ495M9 461 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 OLFML2BQ68BL8 750 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 MICU3Q86XE3 530 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 RAB11FIP4Q86YS3 637 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 CCDC144CPQ8IYA2 1237 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 ANKRD35Q8N283 1001 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 BRF1Q92994 677 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 IL17RAQ96F46 866 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 SPZ1Q9BXG8 430 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 A1CFQ9NQ94 594 aaKnown RBP10.31□□□□□ -0.76
CHD2-216ENST00000629104 DIS3Q9Y2L1 958 aaKnown RBP10.31□□□□□ -0.76
CHD2-216ENST00000629104 CYP46A1Q9Y6A2 500 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 MCM3APO60318 1980 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 PFASO15067 1338 aa10.31□□□□□ -0.76
CHD2-216ENST00000629104 NFIBO00712 420 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 ZBTB5O15062 677 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 ZBTB43O43298 467 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 PLEKHA8P1O95397 391 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 CCL5P13501 91 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 GNAQP50148 359 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 RCAN1P53805 252 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 APOBRQ0VD83 1088 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 MAP3K21Q5TCX8 1036 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 MFSD14CQ5VZR4 134 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 FBXO11Q86XK2 927 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 HOMER1Q86YM7 354 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 FANCBQ8NB91 859 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 CLEC4DQ8WXI8 215 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 PIGSQ96S52 555 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 LZTS2Q9BRK4 669 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 AMNQ9BXJ7 453 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 UPF3BQ9BZI7 483 aaKnown RBP10.3□□□□□ -0.76
CHD2-216ENST00000629104 UNC93B1Q9H1C4 597 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 CYP39A1Q9NYL5 469 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 ABCB11O95342 1321 aa10.3□□□□□ -0.76
CHD2-216ENST00000629104 NID2Q14112 1375 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 PNMA6FA0A0J9YX94 578 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 POTEB2H3BUK9 544 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 PPP1R11O60927 126 aaPredicted RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 CYP2C19P33261 490 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 SOX10P56693 466 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 CACNB2Q08289 660 aaPredicted RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 TOB2Q14106 344 aaPredicted RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 RTN1Q16799 776 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 NSMFQ6X4W1 530 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 TMTC3Q6ZXV5 915 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 SRBD1Q8N5C6 995 aaKnown RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 FAM133AQ8N9E0 248 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 FGD4Q96M96 766 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 TINF2Q9BSI4 451 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 TMEM106CQ9BVX2 250 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.29□□□□□ -0.765e-7■■■■□ 24.3
CHD2-216ENST00000629104 RNF208Q9H0X6 261 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 LRRC37A2A6NM11 1700 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 RPTORQ8N122 1335 aa10.29□□□□□ -0.76
CHD2-216ENST00000629104 KIAA0100Q14667 2235 aaKnown RBP10.29□□□□□ -0.76
CHD2-216ENST00000629104 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 GJB1P08034 283 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 CCND3P30281 292 aaPredicted RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 METAP2P50579 478 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHD2-216ENST00000629104 EVCP57679 992 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 CNTN2Q02246 1040 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 TRAF1Q13077 416 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 BAATQ14032 418 aaPredicted RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 PPP2R5BQ15173 497 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 MAMDC4Q6UXC1 1216 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 SLC30A10Q6XR72 485 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 RNF207Q6ZRF8 634 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 MSL3Q8N5Y2 521 aaKnown RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 MAF1Q9H063 256 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 HMX1Q9NP08 348 aaPredicted RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 PDRG1Q9NUG6 133 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 NAP1L2Q9ULW6 460 aaPredicted RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
CHD2-216ENST00000629104 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
CHD2-216ENST00000629104 PTPDC1A2A3K4 754 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 SOWAHBA6NEL2 793 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms