RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 RIOX1Q9H6W3 641 aa9.18□□□□□ -0.94
CCDC163-204ENST00000628293 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
CCDC163-204ENST00000628293 PAK6Q9NQU5 681 aaPredicted RBP9.18□□□□□ -0.94
CCDC163-204ENST00000628293 BRPF3Q9ULD4 1205 aa9.18□□□□□ -0.94
CCDC163-204ENST00000628293 CCPG1Q9ULG6 757 aa9.18□□□□□ -0.94
CCDC163-204ENST00000628293 NID2Q14112 1375 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 NFIBO00712 420 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 OPLAHO14841 1288 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 CYBAP13498 195 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 RPS6KB1P23443 525 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 CCND3P30281 292 aaPredicted RBP9.17□□□□□ -0.94
CCDC163-204ENST00000628293 CYP2C19P33261 490 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 UBXN2AP68543 259 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 KCTD2Q14681 263 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 APOA5Q6Q788 366 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 CATIPQ7Z7H3 387 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 DPP9Q86TI2 863 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 TRMT44Q8IYL2 757 aaKnown RBP9.17□□□□□ -0.94
CCDC163-204ENST00000628293 FBXL16Q8N461 479 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 NUP133Q8WUM0 1156 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 TRERF1Q96PN7 1200 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 PURBQ96QR8 312 aaKnown RBP9.17□□□□□ -0.94
CCDC163-204ENST00000628293 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCDC163-204ENST00000628293 ZSWIM6Q9HCJ5 1215 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
CCDC163-204ENST00000628293 DIS3Q9Y2L1 958 aaKnown RBP9.17□□□□□ -0.94
CCDC163-204ENST00000628293 CTDP1Q9Y5B0 961 aaPredicted RBP9.17□□□□□ -0.94
CCDC163-204ENST00000628293 RPTORQ8N122 1335 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 CCDC69A6NI79 296 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 GJB1P08034 283 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 HMGB1P09429 215 aaKnown RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 EN2P19622 333 aaPredicted RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 CASTP20810 708 aaKnown RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 CNTN2Q02246 1040 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 BLOC1S2Q6QNY1 142 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 MAMDC4Q6UXC1 1216 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 SLC30A10Q6XR72 485 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 Q6ZUG5 572 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 MICU3Q86XE3 530 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 CCDC144CPQ8IYA2 1237 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 TMTC2Q8N394 836 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 PIGSQ96S52 555 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 SPZ1Q9BXG8 430 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 TM6SF1Q9BZW5 370 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 CRISPLD2Q9H0B8 497 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 VAT1LQ9HCJ6 419 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 FAM217BQ9NTX9 383 aaPredicted RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 CYP39A1Q9NYL5 469 aa9.16□□□□□ -0.94
CCDC163-204ENST00000628293 BIN2Q9UBW5 565 aaPredicted RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 DDX49Q9Y6V7 483 aaKnown RBP9.16□□□□□ -0.94
CCDC163-204ENST00000628293 PFASO15067 1338 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 CNTNAP5Q8WYK1 1306 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 KLF18A0A0U1RQI7 1052 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 ZBTB5O15062 677 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 SNAI1O95863 264 aaPredicted RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 CDC27P30260 824 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 GJA8P48165 433 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 MNX1P50219 401 aaPredicted RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 EVCP57679 992 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 APOBRQ0VD83 1088 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 FUT2Q10981 343 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 USH1GQ495M9 461 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 PRAMEF19Q5SWL8 479 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 NFXL1Q6ZNB6 911 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 RUFY3Q7L099 469 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 ZNF467Q7Z7K2 595 aaPredicted RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 CMTR1Q8N1G2 835 aaKnown RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 ANKRD35Q8N283 1001 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 FANCBQ8NB91 859 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 CTCFLQ8NI51 663 aaPredicted RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 U2AF1L4Q8WU68 220 aaKnown RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 TBC1D5Q92609 795 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 BRF1Q92994 677 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 DDX11Q96FC9 970 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 DEFB118Q96PH6 123 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 TINF2Q9BSI4 451 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 UPF3BQ9BZI7 483 aaKnown RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 KATNBL1Q9H079 304 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 HMX1Q9NP08 348 aaPredicted RBP9.15□□□□□ -0.94
CCDC163-204ENST00000628293 COL20A1Q9P218 1284 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 GTF3C3Q9Y5Q9 886 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 SLC12A7Q9Y666 1083 aa9.15□□□□□ -0.94
CCDC163-204ENST00000628293 DOCK5Q9H7D0 1870 aa9.15□□□□□ -0.95
CCDC163-204ENST00000628293 ABCB11O95342 1321 aa9.14□□□□□ -0.95
CCDC163-204ENST00000628293 SYNGAP1Q96PV0 1343 aa9.14□□□□□ -0.95
CCDC163-204ENST00000628293 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
CCDC163-204ENST00000628293 DHX16O60231 1041 aaKnown RBP9.14□□□□□ -0.95
CCDC163-204ENST00000628293 SGPL1O95470 568 aa9.14□□□□□ -0.95
CCDC163-204ENST00000628293 ZNF865P0CJ78 1059 aaPredicted RBP9.14□□□□□ -0.95
CCDC163-204ENST00000628293 CALM1P0DP23 149 aa9.14□□□□□ -0.95
CCDC163-204ENST00000628293 CALM2P0DP24 149 aa9.14□□□□□ -0.95
CCDC163-204ENST00000628293 CALM3P0DP25 149 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms