RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ATRIPQ8WXE1 791 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 PIGBQ92521 554 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 TTC25Q96NG3 672 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 SAMD9Q5K651 1589 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
VPS8-227ENST00000625842 PPP2R3AQ06190 1150 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 BLIDQ8IZY5 108 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 DCAF4Q8WV16 495 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 NEMP1O14524 444 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 MED7O43513 233 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 CUTAO60888 179 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 SIX6OS1Q8N1H7 587 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 CEP170P1Q96L14 293 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 SRP68Q9UHB9 627 aaKnown RBP12.18□□□□□ -0.46
VPS8-227ENST00000625842 DDX25Q9UHL0 483 aaKnown RBP12.18□□□□□ -0.46
VPS8-227ENST00000625842 FNDC3AQ9Y2H6 1198 aaKnown RBP12.18□□□□□ -0.46
VPS8-227ENST00000625842 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 LAD1O00515 517 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 SLC25A27O95847 323 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 ARL13BQ3SXY8 428 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 BTBD8Q5XKL5 378 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 MIGA2Q7L4E1 593 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 SYCE1Q8N0S2 351 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
VPS8-227ENST00000625842 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 HSF2BPO75031 334 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 CYBBP04839 570 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 EPHB1P54762 984 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 POMGNT1Q8WZA1 660 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 TIGD1Q96MW7 591 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 SUPT20HL2P0C7V6 817 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 VPS52Q8N1B4 723 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 FAM49AQ9H0Q0 323 aaPredicted RBP12.18□□□□□ -0.46
VPS8-227ENST00000625842 TMEM206Q9H813 350 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
VPS8-227ENST00000625842 CSPG5O95196 566 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 CA4P22748 312 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 NECAB1Q8N987 351 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 PLCD4Q9BRC7 762 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 PZPP20742 1482 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 HOXA2O43364 376 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 LDHAP00338 332 aaKnown RBP12.17□□□□□ -0.46
VPS8-227ENST00000625842 TUBBP07437 444 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 TPD52P55327 224 aaPredicted RBP12.17□□□□□ -0.46
VPS8-227ENST00000625842 GPBP1Q86WP2 473 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 SPICE1Q8N0Z3 855 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 SKA2Q8WVK7 121 aaPredicted RBP12.17□□□□□ -0.46
VPS8-227ENST00000625842 PLIN2Q99541 437 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 GDF11O95390 407 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
VPS8-227ENST00000625842 EVCP57679 992 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 UVSSAQ2YD98 709 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 PGBD3Q8N328 593 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 RPF1Q9H9Y2 349 aaKnown RBP12.17□□□□□ -0.46
VPS8-227ENST00000625842 CTTNBP2NLQ9P2B4 639 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 ANKFY1Q9P2R3 1169 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 PLXNC1O60486 1568 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 CCL15-CCL14A0A0B4J2E2 113 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 RGS2P41220 211 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 CCL15Q16663 113 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 TSHZ3Q63HK5 1081 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 RINT1Q6NUQ1 792 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 RAB23Q9ULC3 237 aa12.17□□□□□ -0.46
VPS8-227ENST00000625842 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 XRCC5P13010 732 aaKnown RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 GBP1P32455 592 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 CTDSPL2Q05D32 466 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 FAM107BQ9H098 131 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 GREM2Q9H772 168 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 KMT5AQ9NQR1 393 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 FAN1Q9Y2M0 1017 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 STXBP3O00186 592 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 DRP2Q13474 957 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 BFSP2Q13515 415 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 ENGASEQ8NFI3 743 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 G3BP2Q9UN86 482 aaKnown RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 CRB1P82279 1406 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 COL15A1P39059 1388 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 ABCB11O95342 1321 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms