RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 AGPAT5Q9NUQ2 364 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 FLT1P17948 1338 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 RPS6KA4O75676 772 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 BAG3O95817 575 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 PRPHP41219 470 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 KLK7P49862 253 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 DNM2P50570 870 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 HERVK_113P62684 666 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 TUBB4BP68371 445 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 HDXQ7Z353 690 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 L1RE1Q9UN81 338 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 SRGNP10124 158 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 PDE4DQ08499 809 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 STK4Q13043 487 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 CCDC122Q5T0U0 273 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
VARS2-213ENST00000625423 HAUS4Q9H6D7 363 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 NRAPQ86VF7 1730 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
VARS2-213ENST00000625423 OR52Z1P0C646 297 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
VARS2-213ENST00000625423 HNRNPH2P55795 449 aaKnown RBP12.61□□□□□ -0.39
VARS2-213ENST00000625423 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 TRIM9Q9C026 710 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 ZMYND12Q9H0C1 365 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 RASSF10A6NK89 507 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 FCER1AP12319 257 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 ASIC1P78348 528 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 TBC1D8BQ0IIM8 1120 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 NFIXQ14938 502 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 P2RX5Q93086 422 aa12.61□□□□□ -0.39
VARS2-213ENST00000625423 PSMD14O00487 310 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 RGL2O15211 777 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 CCNE1P24864 410 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 TECP42680 631 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 GSTO1P78417 241 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
VARS2-213ENST00000625423 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 CNOT6LQ96LI5 555 aaKnown RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 AK8Q96MA6 479 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 ATP1A1P05023 1023 aaKnown RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 NT5C2P49902 561 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 PPP4CP60510 307 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 MEA1Q16626 185 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 KRT25Q7Z3Z0 450 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 LZTS2Q9BRK4 669 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 TTYH3Q9C0H2 523 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 NKRFO15226 690 aaKnown RBP eCLIP12.6□□□□□ -0.39
VARS2-213ENST00000625423 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 GPS2Q13227 327 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 KIAA1328Q86T90 577 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 TXLNBQ8N3L3 684 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 EYA3Q99504 573 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 SPZ1Q9BXG8 430 aa12.6□□□□□ -0.39
VARS2-213ENST00000625423 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
VARS2-213ENST00000625423 RCCD1A6NED2 376 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 CDK8P49336 464 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 KRT83P78385 493 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 LACRTQ9GZZ8 138 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 MAGEF1Q9HAY2 307 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 CCDC88AQ3V6T2 1871 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 BICDL2A1A5D9 508 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 SEMA3FQ13275 785 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 TBCKQ8TEA7 893 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 C7orf25Q9BPX7 421 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 ZNHIT6Q9NWK9 470 aaKnown RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
VARS2-213ENST00000625423 LEMD3Q9Y2U8 911 aa12.59□□□□□ -0.39
VARS2-213ENST00000625423 CYLC1P35663 651 aaPredicted RBP12.58□□□□□ -0.39
VARS2-213ENST00000625423 BTDP43251 543 aa12.58□□□□□ -0.39
VARS2-213ENST00000625423 CASP8Q14790 479 aa12.58□□□□□ -0.39
VARS2-213ENST00000625423 RRP36Q96EU6 259 aaKnown RBP12.58□□□□□ -0.39
VARS2-213ENST00000625423 CAPZA3Q96KX2 299 aa12.58□□□□□ -0.39
VARS2-213ENST00000625423 MMS19Q96T76 1030 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms