RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 PDGFCQ9NRA1 345 aa11.02□□□□□ -0.65
TARDBP-227ENST00000622057 HELLSQ9NRZ9 838 aa11.02□□□□□ -0.65
TARDBP-227ENST00000622057 CCPG1Q9ULG6 757 aa11.02□□□□□ -0.65
TARDBP-227ENST00000622057 MROH7Q68CQ1 1323 aa11.02□□□□□ -0.65
TARDBP-227ENST00000622057 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
TARDBP-227ENST00000622057 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-227ENST00000622057 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 FGAP02671 866 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 FOSL2P15408 326 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 PTGS1P23219 599 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 PDE1AP54750 535 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 MCMDC2Q4G0Z9 681 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 TMEM199Q8N511 208 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-227ENST00000622057 RILPL2Q969X0 211 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 FAM227BQ96M60 508 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-227ENST00000622057 AP5M1Q9H0R1 490 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 ANAPC4Q9UJX5 808 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 TBX21Q9UL17 535 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 PLXNA1Q9UIW2 1896 aa11.01□□□□□ -0.65
TARDBP-227ENST00000622057 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-227ENST00000622057 CTAGE5O15320 804 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 ZEB2O60315 1214 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 ACRP10323 421 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 CSF2RAP15509 400 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 SMPD1P17405 629 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 HAND2P61296 217 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.656e-7■□□□□ 8.8
TARDBP-227ENST00000622057 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
TARDBP-227ENST00000622057 ALX1Q15699 326 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 TMEM63BQ5T3F8 832 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 IQSEC1Q6DN90 963 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 TAPT1Q6NXT6 567 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 KIAA1211Q6ZU35 1233 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 TLK2Q86UE8 772 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 FBXO16Q8IX29 292 aaPredicted RBP11□□□□□ -0.65
TARDBP-227ENST00000622057 FAM126BQ8IXS8 530 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 DCAF4Q8WV16 495 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 TMEM47Q9BQJ4 181 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 CYP39A1Q9NYL5 469 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 GNEQ9Y223 722 aaKnown RBP11□□□□□ -0.65
TARDBP-227ENST00000622057 ASTN1O14525 1302 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 LTBP2Q14767 1821 aa11□□□□□ -0.65
TARDBP-227ENST00000622057 LAMA2P24043 3122 aaKnown RBP10.99□□□□□ -0.65
TARDBP-227ENST00000622057 A0A0D9SFI3 127 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 GRXCR1A8MXD5 290 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 ORC4O43929 436 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 ICAM1P05362 532 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 FGRP09769 529 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 HSPD1P10809 573 aaKnown RBP10.99□□□□□ -0.65
TARDBP-227ENST00000622057 TOP1P11387 765 aaKnown RBP10.99□□□□□ -0.65
TARDBP-227ENST00000622057 DNAJB2P25686 324 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 NOVP48745 357 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 NKX3-2P78367 333 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 ITGA7Q13683 1181 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 GRIN2CQ14957 1233 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 FSCN1Q16658 493 aaKnown RBP10.99□□□□□ -0.65
TARDBP-227ENST00000622057 TMEM240Q5SV17 173 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 SYDE2Q5VT97 1194 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 B4GALNT3Q6L9W6 998 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 ZNF365Q70YC5 407 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 C16orf59Q7L2K0 433 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 LNPKQ9C0E8 428 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
TARDBP-227ENST00000622057 MYH4Q9Y623 1939 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 A0A0C4DFX4 3053 aa10.99□□□□□ -0.65
TARDBP-227ENST00000622057 TMEM265A0A087WTH1 108 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 PTPDC1A2A3K4 754 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 CABYRO75952 493 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 CD4P01730 458 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 CYP2C18P33260 490 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 CCL23P55773 120 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 PSMC6P62333 389 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-227ENST00000622057 HDAC1Q13547 482 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-227ENST00000622057 ZNF589Q86UQ0 364 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-227ENST00000622057 TIFAQ96CG3 184 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 ZNF576Q9H609 170 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 TCP11L1Q9NUJ3 509 aa10.98□□□□□ -0.65
TARDBP-227ENST00000622057 ADD3Q9UEY8 706 aaKnown RBP10.98□□□□□ -0.65
TARDBP-227ENST00000622057 NFIBO00712 420 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 FGBP02675 491 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 CALML3P27482 149 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 PBX2P40425 430 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 ALDH5A1P51649 535 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-227ENST00000622057 BTNL9Q6UXG8 535 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 RNF207Q6ZRF8 634 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 MFSD6Q6ZSS7 791 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 SLC43A3Q8NBI5 491 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 TTC14Q96N46 770 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 ZKSCAN3Q9BRR0 538 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 PBX4Q9BYU1 374 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 WDR11Q9BZH6 1224 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 TRPV6Q9H1D0 765 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 HIPK3Q9H422 1215 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 VTA1Q9NP79 307 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 IL23AQ9NPF7 189 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms