RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 KCNJ4P48050 445 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
TARDBP-224ENST00000621573 CHRNDQ07001 517 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 GRIK4Q16099 956 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 AOC3Q16853 763 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 FBXO33Q7Z6M2 555 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 JDP2Q8WYK2 163 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 EYA3Q99504 573 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 RTFDC1Q9BY42 306 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-224ENST00000621573 BCO2Q9BYV7 579 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 ANKRD2Q9GZV1 360 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
TARDBP-224ENST00000621573 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 POLLQ9UGP5 575 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
TARDBP-224ENST00000621573 XDHP47989 1333 aa10.04□□□□□ -0.8
TARDBP-224ENST00000621573 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 SRGAP3O43295 1099 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 ELNP15502 786 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
TARDBP-224ENST00000621573 NIM1KQ8IY84 436 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 TMEM151AQ8N4L1 468 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 KLHDC4Q8TBB5 520 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 TBC1D16Q8TBP0 767 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 ZNF526Q8TF50 670 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-224ENST00000621573 PUS3Q9BZE2 481 aaKnown RBP10.03□□□□□ -0.8
TARDBP-224ENST00000621573 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
TARDBP-224ENST00000621573 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
TARDBP-224ENST00000621573 TM4SF5O14894 197 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 FSCN2O14926 492 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 PRPF40AO75400 957 aaKnown RBP10.02□□□□□ -0.81
TARDBP-224ENST00000621573 TAF5LO75529 589 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 RFX5P48382 616 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-224ENST00000621573 KIAA2012Q0VF49 1180 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 METTL24Q5JXM2 366 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 FAM117BQ6P1L5 589 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 NXPE4Q6UWF7 544 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 MAP4K3Q8IVH8 894 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 GALNT11Q8NCW6 608 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 GPR101Q96P66 508 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-224ENST00000621573 SIL1Q9H173 461 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 VPS33BQ9H267 617 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 SRA1Q9HD15 236 aaKnown RBP10.02□□□□□ -0.81
TARDBP-224ENST00000621573 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
TARDBP-224ENST00000621573 LEMD3Q9Y2U8 911 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 ARFGEF1Q9Y6D6 1849 aa10.02□□□□□ -0.81
TARDBP-224ENST00000621573 LAMB2P55268 1798 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 EYA2O00167 538 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 DLL1O00548 723 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 ITPKAP23677 461 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 EIF6P56537 245 aaKnown RBP10.01□□□□□ -0.81
TARDBP-224ENST00000621573 ATP8B2P98198 1209 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 PTPN12Q05209 780 aaKnown RBP10.01□□□□□ -0.81
TARDBP-224ENST00000621573 LRRC24Q50LG9 513 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 OSBPL7Q9BZF2 842 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 RNF19AQ9NV58 838 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 SUPT16HQ9Y5B9 1047 aaKnown RBP10.01□□□□□ -0.81
TARDBP-224ENST00000621573 ZNF804BA4D1E1 1349 aa10.01□□□□□ -0.81
TARDBP-224ENST00000621573 SNED1Q8TER0 1413 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 COL4A1P02462 1669 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 PNMA6EA0A0J9YXQ4 647 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 WTIPA6NIX2 430 aaPredicted RBP10□□□□□ -0.81
TARDBP-224ENST00000621573 SNAP23O00161 211 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 SOX1O00570 391 aaPredicted RBP10□□□□□ -0.81
TARDBP-224ENST00000621573 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
TARDBP-224ENST00000621573 MTX1Q13505 466 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 HGSNATQ68CP4 663 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 SHISA2Q6UWI4 295 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 DUSP9Q99956 384 aaKnown RBP10□□□□□ -0.81
TARDBP-224ENST00000621573 DBNDD1Q9H9R9 158 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 MROH5Q6ZUA9 1318 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 TAF1P21675 1872 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 CACNA1SQ13698 1873 aa10□□□□□ -0.81
TARDBP-224ENST00000621573 GLTPD2A6NH11 291 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 DDNO94850 711 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-224ENST00000621573 ESRRAP11474 423 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-224ENST00000621573 SELPP16109 830 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 FCGRTP55899 365 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 FGD1P98174 961 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
TARDBP-224ENST00000621573 OS9Q13438 667 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-224ENST00000621573 IKBKEQ14164 716 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 CEP85Q6P2H3 762 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 SLC7A3Q8WY07 619 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 WNT8BQ93098 351 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 CRBNQ96SW2 442 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 CLEC4MQ9H2X3 399 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-224ENST00000621573 ZNF576Q9H609 170 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 COPRSQ9NQ92 184 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 ZBTB40Q9NUA8 1239 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 PPP4R2Q9NY27 417 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 ZNRF3Q9ULT6 936 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 KDM2BQ8NHM5 1336 aa9.99□□□□□ -0.81
TARDBP-224ENST00000621573 FZD9O00144 591 aa9.98□□□□□ -0.81
TARDBP-224ENST00000621573 ECE2O60344 883 aa9.98□□□□□ -0.81
TARDBP-224ENST00000621573 SURF6O75683 361 aaKnown RBP9.98□□□□□ -0.81
TARDBP-224ENST00000621573 RAD17O75943 681 aa9.98□□□□□ -0.81
TARDBP-224ENST00000621573 CIAO1O76071 339 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms