RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 PNMA1Q8ND90 353 aa24.06■■□□□ 1.44
SMC6-210ENST00000621152 PURBQ96QR8 312 aaKnown RBP24.06■■□□□ 1.44
SMC6-210ENST00000621152 UBA5Q9GZZ9 404 aa24.06■■□□□ 1.44
SMC6-210ENST00000621152 KATNBL1Q9H079 304 aa24.06■■□□□ 1.44
SMC6-210ENST00000621152 SPC25Q9HBM1 224 aa24.06■■□□□ 1.44
SMC6-210ENST00000621152 PRDM5Q9NQX1 630 aaPredicted RBP24.06■■□□□ 1.44
SMC6-210ENST00000621152 A0A1W2PQ45 241 aaPredicted RBP24.05■■□□□ 1.44
SMC6-210ENST00000621152 A0A1W2PQY0 241 aa24.05■■□□□ 1.44
SMC6-210ENST00000621152 ADCY6O43306 1168 aa24.05■■□□□ 1.44
SMC6-210ENST00000621152 ACLYP53396 1101 aa24.05■■□□□ 1.44
SMC6-210ENST00000621152 IRX5P78411 483 aaPredicted RBP24.05■■□□□ 1.44
SMC6-210ENST00000621152 GPATCH4Q5T3I0 446 aaKnown RBP24.05■■□□□ 1.44
SMC6-210ENST00000621152 NOL8Q76FK4 1167 aaKnown RBP24.05■■□□□ 1.44
SMC6-210ENST00000621152 CNNM2Q9H8M5 875 aa24.05■■□□□ 1.44
SMC6-210ENST00000621152 PNMA2Q9UL42 364 aa24.05■■□□□ 1.44
SMC6-210ENST00000621152 DDX49Q9Y6V7 483 aaKnown RBP24.05■■□□□ 1.44
SMC6-210ENST00000621152 C6orf222P0C671 652 aaPredicted RBP24.04■■□□□ 1.44
SMC6-210ENST00000621152 TNFAIP2Q03169 654 aa24.04■■□□□ 1.44
SMC6-210ENST00000621152 ENAHQ8N8S7 591 aaPredicted RBP24.04■■□□□ 1.44
SMC6-210ENST00000621152 NUP133Q8WUM0 1156 aa24.04■■□□□ 1.44
SMC6-210ENST00000621152 LRCH3Q96II8 777 aa24.04■■□□□ 1.44
SMC6-210ENST00000621152 CPVLQ9H3G5 476 aa24.04■■□□□ 1.44
SMC6-210ENST00000621152 PTPDC1A2A3K4 754 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 MYADML2A6NDP7 307 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 NFIBO00712 420 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 GJA9P57773 515 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 PTH1RQ03431 593 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 GNASQ5JWF2 1037 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 CCSAPQ6IQ19 270 aaPredicted RBP24.03■■□□□ 1.44
SMC6-210ENST00000621152 EEPD1Q7L9B9 569 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 VTI1AQ96AJ9 217 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 UBAC1Q9BSL1 405 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 STARD7Q9NQZ5 370 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 ASTN1O14525 1302 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 RAD50Q92878 1312 aa24.03■■□□□ 1.44
SMC6-210ENST00000621152 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.02■■□□□ 1.44
SMC6-210ENST00000621152 MOXD2PA6NHM9 499 aa24.02■■□□□ 1.44
SMC6-210ENST00000621152 SH3RF1Q7Z6J0 888 aa24.02■■□□□ 1.44
SMC6-210ENST00000621152 PCSK9Q8NBP7 692 aaKnown RBP24.02■■□□□ 1.44
SMC6-210ENST00000621152 CLEC4DQ8WXI8 215 aa24.02■■□□□ 1.44
SMC6-210ENST00000621152 ADD3Q9UEY8 706 aaKnown RBP24.02■■□□□ 1.44
SMC6-210ENST00000621152 TNKSO95271 1327 aa24.02■■□□□ 1.44
SMC6-210ENST00000621152 CALML3P27482 149 aa24.01■■□□□ 1.43
SMC6-210ENST00000621152 IQSEC1Q6DN90 963 aa24.01■■□□□ 1.43
SMC6-210ENST00000621152 RNF207Q6ZRF8 634 aa24.01■■□□□ 1.43
SMC6-210ENST00000621152 UPF3AQ9H1J1 476 aaKnown RBP24.01■■□□□ 1.43
SMC6-210ENST00000621152 PDGFCQ9NRA1 345 aa24.01■■□□□ 1.43
SMC6-210ENST00000621152 TRIM43BA6NCK2 446 aa24■■□□□ 1.43
SMC6-210ENST00000621152 PQBP1O60828 265 aaKnown RBP24■■□□□ 1.43
SMC6-210ENST00000621152 ASGR1P07306 291 aa24■■□□□ 1.43
SMC6-210ENST00000621152 CST5P28325 142 aaPredicted RBP24■■□□□ 1.43
SMC6-210ENST00000621152 TRDNQ13061 729 aa24■■□□□ 1.43
SMC6-210ENST00000621152 LRIT3Q3SXY7 679 aa24■■□□□ 1.43
SMC6-210ENST00000621152 TAPT1Q6NXT6 567 aa24■■□□□ 1.43
SMC6-210ENST00000621152 BADQ92934 168 aa24■■□□□ 1.43
SMC6-210ENST00000621152 TRIM43Q96BQ3 446 aaPredicted RBP24■■□□□ 1.43
SMC6-210ENST00000621152 GLT1D1Q96MS3 346 aa24■■□□□ 1.43
SMC6-210ENST00000621152 VAT1LQ9HCJ6 419 aa24■■□□□ 1.43
SMC6-210ENST00000621152 PDLIM7Q9NR12 457 aa24■■□□□ 1.43
SMC6-210ENST00000621152 U3KPZ7 1027 aaPredicted RBP24■■□□□ 1.43
SMC6-210ENST00000621152 DYNC1LI2O43237 492 aaPredicted RBP23.99■■□□□ 1.43
SMC6-210ENST00000621152 PARP1P09874 1014 aaKnown RBP23.99■■□□□ 1.43
SMC6-210ENST00000621152 USH1GQ495M9 461 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 ASPRV1Q53RT3 343 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 IFIT1BQ5T764 474 aaKnown RBP23.99■■□□□ 1.43
SMC6-210ENST00000621152 KIAA1211Q6ZU35 1233 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 CYB5R4Q7L1T6 521 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 ADGRF4Q8IZF3 695 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 MORC4Q8TE76 937 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 WDR19Q8NEZ3 1342 aa23.99■■□□□ 1.43
SMC6-210ENST00000621152 CTAGE5O15320 804 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 SGSM2O43147 1006 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 CYP21A2P08686 494 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 CLTBP09497 229 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 SMPD1P17405 629 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 ALDH5A1P51649 535 aaPredicted RBP23.98■■□□□ 1.43
SMC6-210ENST00000621152 BEX3Q00994 111 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 FBXO16Q8IX29 292 aaPredicted RBP23.98■■□□□ 1.43
SMC6-210ENST00000621152 AP5M1Q9H0R1 490 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 GNEQ9Y223 722 aaKnown RBP23.98■■□□□ 1.43
SMC6-210ENST00000621152 ELP1O95163 1332 aa23.98■■□□□ 1.43
SMC6-210ENST00000621152 DCDC2CA8MYV0 355 aa23.97■■□□□ 1.43
SMC6-210ENST00000621152 DHX16O60231 1041 aaKnown RBP23.97■■□□□ 1.43
SMC6-210ENST00000621152 RPS6P62753 249 aaKnown RBP23.97■■□□□ 1.43
SMC6-210ENST00000621152 NKX3-2P78367 333 aa23.97■■□□□ 1.43
SMC6-210ENST00000621152 CDC37Q16543 378 aaPredicted RBP23.97■■□□□ 1.43
SMC6-210ENST00000621152 SLC30A10Q6XR72 485 aa23.97■■□□□ 1.43
SMC6-210ENST00000621152 TOX2Q96NM4 488 aa23.97■■□□□ 1.43
SMC6-210ENST00000621152 VTA1Q9NP79 307 aa23.97■■□□□ 1.43
SMC6-210ENST00000621152 TMEM39AQ9NV64 488 aa23.97■■□□□ 1.43
SMC6-210ENST00000621152 MCM3APO60318 1980 aa23.96■■□□□ 1.43
SMC6-210ENST00000621152 PTGS1P23219 599 aa23.96■■□□□ 1.43
SMC6-210ENST00000621152 FAAP100Q0VG06 881 aa23.96■■□□□ 1.43
SMC6-210ENST00000621152 SEC23AQ15436 765 aa23.96■■□□□ 1.43
SMC6-210ENST00000621152 TMEM63BQ5T3F8 832 aa23.96■■□□□ 1.43
SMC6-210ENST00000621152 ANKRD33Q7Z3H0 272 aa23.96■■□□□ 1.43
SMC6-210ENST00000621152 LOC102724159A0A0B4J2E5 919 aa23.95■■□□□ 1.42
SMC6-210ENST00000621152 ITGB8P26012 769 aa23.95■■□□□ 1.42
SMC6-210ENST00000621152 PWP2Q15269 919 aaKnown RBP23.95■■□□□ 1.42
SMC6-210ENST00000621152 TLK2Q86UE8 772 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms