RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 UBA5Q9GZZ9 404 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 TMEM60Q9H2L4 133 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 ADD3Q9UEY8 706 aaKnown RBP11.94□□□□□ -0.5
CDH1-214ENST00000621016 FAM169AQ9Y6X4 670 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 KCNJ18B7U540 433 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 KIF3CO14782 793 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 ZPR1O75312 459 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 INPP5BP32019 993 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 TXLNAP40222 546 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 FUT2Q10981 343 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 PAK1Q13153 545 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 KCNJ12Q14500 433 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 ENOX2Q16206 610 aaKnown RBP11.94□□□□□ -0.5
CDH1-214ENST00000621016 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
CDH1-214ENST00000621016 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 AKAP11Q9UKA4 1901 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 FAM237AA0A1B0GTK4 181 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 PMS1P54277 932 aaKnown RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 CCDC26Q8TAB7 109 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 SH3RF3Q8TEJ3 882 aaPredicted RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 RIN2Q8WYP3 895 aaPredicted RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 SPDL1Q96EA4 605 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 SCLT1Q96NL6 688 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 RANBP1P43487 201 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 KLK7P49862 253 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 IRX1P78414 480 aaPredicted RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 THEMIS2Q5TEJ8 643 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 FERMT2Q96AC1 680 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 TPD52L2O43399 206 aaKnown RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 MFAP3LO75121 409 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 GCFC2P16383 781 aaKnown RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 UBE4AQ14139 1066 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 DTHD1Q6ZMT9 781 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 CLEC10AQ8IUN9 316 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 BLIDQ8IZY5 108 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 GOLGA1Q92805 767 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 TATDN2Q93075 761 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 GSDMAQ96QA5 445 aa11.93□□□□□ -0.5
CDH1-214ENST00000621016 BSDC1Q9NW68 430 aaPredicted RBP11.93□□□□□ -0.5
CDH1-214ENST00000621016 DCCP43146 1447 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 MACROD2A1Z1Q3 448 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
CDH1-214ENST00000621016 COPB1P53618 953 aaKnown RBP11.92□□□□□ -0.5
CDH1-214ENST00000621016 CYP27A1Q02318 531 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 NPY5RQ15761 445 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 C1QTNF12Q5T7M4 302 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 ARMC2Q8NEN0 867 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
CDH1-214ENST00000621016 ZKSCAN4Q969J2 545 aaPredicted RBP11.92□□□□□ -0.5
CDH1-214ENST00000621016 GJA10Q969M2 543 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 C8orf37Q96NL8 207 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 CNTNAP5Q8WYK1 1306 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 CTAGE9A4FU28 777 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 B4DLN1 442 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 IDEP14735 1019 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 TRIM21P19474 475 aaKnown RBP11.92□□□□□ -0.5
CDH1-214ENST00000621016 TECP42680 631 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDH1-214ENST00000621016 ERVK-24P63145 666 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 PICALMQ13492 652 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 NFIXQ14938 502 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 MICAL1Q8TDZ2 1067 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 ATRNO75882 1429 aa11.92□□□□□ -0.5
CDH1-214ENST00000621016 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 ADCY2Q08462 1091 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 NT5DC1Q5TFE4 455 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 DYMQ7RTS9 669 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 KIFC2Q96AC6 838 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 KIF5BP33176 963 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 TXKP42681 527 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 NAPAP54920 295 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 ASIC1P78348 528 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 ATP2C1P98194 919 aaPredicted RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 KCTD19Q17RG1 926 aaPredicted RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 CCDC181Q5TID7 509 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 APTXQ7Z2E3 356 aaKnown RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 TTC26A0AVF1 554 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 PPFIA4O75335 1185 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 SLURP2P0DP57 97 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 GBP2P32456 591 aaPredicted RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 KIAA1328Q86T90 577 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 UBXN6Q9BZV1 441 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
CDH1-214ENST00000621016 MAGEC2Q9UBF1 373 aaPredicted RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 MKRN1Q9UHC7 482 aaKnown RBP11.91□□□□□ -0.5
CDH1-214ENST00000621016 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
CDH1-214ENST00000621016 GOLGA6L9A6NEM1 432 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms