RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ZBTB5O15062 677 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 ZBTB43O43298 467 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 CYTH3O43739 400 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 IGHA2P01877 340 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 CCL5P13501 91 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 USH1GQ495M9 461 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 MAP3K21Q5TCX8 1036 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 FBXO11Q86XK2 927 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 SPZ1Q9BXG8 430 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 UPF3BQ9BZI7 483 aaKnown RBP21.24■□□□□ 0.99
LITAF-220ENST00000620789 PFASO15067 1338 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 BRCA2P51587 3418 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 PLEKHA8P1O95397 391 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 SMARCA1P28370 1054 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 RCAN1P53805 252 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 APOBRQ0VD83 1088 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 MFSD14CQ5VZR4 134 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 HOMER1Q86YM7 354 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 IL17RAQ96F46 866 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 PIGSQ96S52 555 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 TMEM106CQ9BVX2 250 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 MYH6P13533 1939 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 ABCB11O95342 1321 aa21.23■□□□□ 0.99
LITAF-220ENST00000620789 RBBP6Q7Z6E9 1792 aaKnown RBP21.23■□□□□ 0.99
LITAF-220ENST00000620789 NFIBO00712 420 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 PRKAR2AP13861 404 aaKnown RBP21.22■□□□□ 0.99
LITAF-220ENST00000620789 SOX10P56693 466 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 CACNB2Q08289 660 aaPredicted RBP21.22■□□□□ 0.99
LITAF-220ENST00000620789 IFFO2Q5TF58 517 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 NSMFQ6X4W1 530 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 TMTC3Q6ZXV5 915 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 CLEC4DQ8WXI8 215 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 AMNQ9BXJ7 453 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 RNF208Q9H0X6 261 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 RBM28Q9NW13 759 aaKnown RBP21.22■□□□□ 0.99
LITAF-220ENST00000620789 CYP39A1Q9NYL5 469 aa21.22■□□□□ 0.99
LITAF-220ENST00000620789 GOLGA8AA7E2F4 631 aa21.21■□□□□ 0.99
LITAF-220ENST00000620789 GOLGA8BA8MQT2 603 aa21.21■□□□□ 0.99
LITAF-220ENST00000620789 POTEB2H3BUK9 544 aa21.21■□□□□ 0.99
LITAF-220ENST00000620789 PPP1R11O60927 126 aaPredicted RBP21.21■□□□□ 0.99
LITAF-220ENST00000620789 CYP2C19P33261 490 aa21.21■□□□□ 0.99
LITAF-220ENST00000620789 RTN1Q16799 776 aa21.21■□□□□ 0.99
LITAF-220ENST00000620789 SRBD1Q8N5C6 995 aaKnown RBP21.21■□□□□ 0.99
LITAF-220ENST00000620789 NAP1L2Q9ULW6 460 aaPredicted RBP21.21■□□□□ 0.99
LITAF-220ENST00000620789 RPTORQ8N122 1335 aa21.21■□□□□ 0.99
LITAF-220ENST00000620789 PNMA6FA0A0J9YX94 578 aa21.2■□□□□ 0.98
LITAF-220ENST00000620789 TOB2Q14106 344 aaPredicted RBP21.2■□□□□ 0.98
LITAF-220ENST00000620789 ZNF467Q7Z7K2 595 aaPredicted RBP21.2■□□□□ 0.98
LITAF-220ENST00000620789 CMTR1Q8N1G2 835 aaKnown RBP21.2■□□□□ 0.98
LITAF-220ENST00000620789 FAM133AQ8N9E0 248 aa21.2■□□□□ 0.98
LITAF-220ENST00000620789 RRP36Q96EU6 259 aaKnown RBP21.2■□□□□ 0.98
LITAF-220ENST00000620789 TINF2Q9BSI4 451 aa21.2■□□□□ 0.98
LITAF-220ENST00000620789 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.2■□□□□ 0.98
LITAF-220ENST00000620789 HMX1Q9NP08 348 aaPredicted RBP21.2■□□□□ 0.98
LITAF-220ENST00000620789 PDRG1Q9NUG6 133 aa21.2■□□□□ 0.98
LITAF-220ENST00000620789 MRPL11Q9Y3B7 192 aaKnown RBP21.2■□□□□ 0.98
LITAF-220ENST00000620789 BAZ2BQ9UIF8 2168 aaKnown RBP21.19■□□□□ 0.98
LITAF-220ENST00000620789 PTPDC1A2A3K4 754 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 POTEFA5A3E0 1075 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 METAP2P50579 478 aaKnown RBP eCLIP21.19■□□□□ 0.98
LITAF-220ENST00000620789 EVCP57679 992 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 CNTN2Q02246 1040 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 TRAF1Q13077 416 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 BAATQ14032 418 aaPredicted RBP21.19■□□□□ 0.98
LITAF-220ENST00000620789 PPP2R5BQ15173 497 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 MSL3Q8N5Y2 521 aaKnown RBP21.19■□□□□ 0.98
LITAF-220ENST00000620789 FGD4Q96M96 766 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 MAF1Q9H063 256 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 PAK6Q9NQU5 681 aaPredicted RBP21.19■□□□□ 0.98
LITAF-220ENST00000620789 PCDHA1Q9Y5I3 950 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 NID2Q14112 1375 aa21.19■□□□□ 0.98
LITAF-220ENST00000620789 GJB1P08034 283 aa21.18■□□□□ 0.98
LITAF-220ENST00000620789 MAMDC4Q6UXC1 1216 aa21.18■□□□□ 0.98
LITAF-220ENST00000620789 RNF207Q6ZRF8 634 aa21.18■□□□□ 0.98
LITAF-220ENST00000620789 RGS22Q8NE09 1264 aa21.18■□□□□ 0.98
LITAF-220ENST00000620789 PIBF1Q8WXW3 757 aa21.18■□□□□ 0.98
LITAF-220ENST00000620789 SEC63Q9UGP8 760 aaKnown RBP21.18■□□□□ 0.98
LITAF-220ENST00000620789 LCTP09848 1927 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 SOWAHBA6NEL2 793 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 CYBAP13498 195 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 CDC27P30260 824 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 CCND3P30281 292 aaPredicted RBP21.17■□□□□ 0.98
LITAF-220ENST00000620789 RPS6P62753 249 aaKnown RBP21.17■□□□□ 0.98
LITAF-220ENST00000620789 SLC30A10Q6XR72 485 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 MCF2L2Q86YR7 1114 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 CCDC82Q8N4S0 544 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 FAM217BQ9NTX9 383 aaPredicted RBP21.17■□□□□ 0.98
LITAF-220ENST00000620789 SYNGAP1Q96PV0 1343 aa21.17■□□□□ 0.98
LITAF-220ENST00000620789 KIAA0100Q14667 2235 aaKnown RBP21.17■□□□□ 0.98
LITAF-220ENST00000620789 CNTNAP5Q8WYK1 1306 aa21.16■□□□□ 0.98
LITAF-220ENST00000620789 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
LITAF-220ENST00000620789 CALML3P27482 149 aa21.16■□□□□ 0.98
LITAF-220ENST00000620789 FUT2Q10981 343 aa21.16■□□□□ 0.98
LITAF-220ENST00000620789 DEFB118Q96PH6 123 aa21.16■□□□□ 0.98
LITAF-220ENST00000620789 ALDH8A1Q9H2A2 487 aaPredicted RBP21.16■□□□□ 0.98
LITAF-220ENST00000620789 NRBP1Q9UHY1 535 aa21.16■□□□□ 0.98
LITAF-220ENST00000620789 ASTN1O14525 1302 aa21.15■□□□□ 0.98
LITAF-220ENST00000620789 OPLAHO14841 1288 aa21.15■□□□□ 0.98
LITAF-220ENST00000620789 PDIA3P30101 505 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms