RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 ACVR2BQ13705 512 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 CHD1LQ86WJ1 897 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 CHURC1Q8WUH1 139 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 STAG1Q8WVM7 1258 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 ATXN2LQ8WWM7 1075 aaKnown RBP26.06■■□□□ 1.76
SRRT-218ENST00000620394 FGD4Q96M96 766 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 ABHD16BQ9H3Z7 469 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.06■■□□□ 1.76
SRRT-218ENST00000620394 THEGQ9P2T0 379 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 CCDC171Q6TFL3 1326 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 TLR3O15455 904 aaKnown RBP26.05■■□□□ 1.76
SRRT-218ENST00000620394 HSPD1P10809 573 aaKnown RBP26.05■■□□□ 1.76
SRRT-218ENST00000620394 CSF2RAP15509 400 aa26.05■■□□□ 1.76
SRRT-218ENST00000620394 GJA9P57773 515 aa26.05■■□□□ 1.76
SRRT-218ENST00000620394 NUCB1Q02818 461 aa26.05■■□□□ 1.76
SRRT-218ENST00000620394 ZNF536O15090 1300 aa26.05■■□□□ 1.76
SRRT-218ENST00000620394 LCTP09848 1927 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 ARVCFO00192 962 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 ADCY6O43306 1168 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 RANBP6O60518 1105 aaKnown RBP26.04■■□□□ 1.76
SRRT-218ENST00000620394 IGHDP01880 384 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 PBX2P40425 430 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 RAB30Q15771 203 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 C16orf59Q7L2K0 433 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 PLEKHM2Q8IWE5 1019 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 FAM126BQ8IXS8 530 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 VTI1AQ96AJ9 217 aa26.04■■□□□ 1.76
SRRT-218ENST00000620394 TRIM6-TRIM34B2RNG4 842 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 MCCP23508 829 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 CCDC144BQ3MJ40 725 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 RCSD1Q6JBY9 416 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 RASGRP2Q7LDG7 609 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 EXOC6Q8TAG9 804 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 PPP1R12CQ9BZL4 782 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 MTIF3Q9H2K0 278 aaKnown RBP26.03■■□□□ 1.76
SRRT-218ENST00000620394 PRDM12Q9H4Q4 367 aa26.03■■□□□ 1.76
SRRT-218ENST00000620394 GRXCR1A8MXD5 290 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 COL9A1P20849 921 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 B4GALNT3Q6L9W6 998 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 ARMCX2Q7L311 632 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 ANKRD35Q8N283 1001 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 ACAD9Q9H845 621 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 TCP11L1Q9NUJ3 509 aa26.02■■□□□ 1.76
SRRT-218ENST00000620394 PCP11498 1178 aaKnown RBP26.01■■□□□ 1.75
SRRT-218ENST00000620394 IRX5P78411 483 aaPredicted RBP26.01■■□□□ 1.75
SRRT-218ENST00000620394 TKFCQ3LXA3 575 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 GNASQ5JWF2 1037 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 ZNF365Q70YC5 407 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 KCTD1Q719H9 257 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 DCAF4Q8WV16 495 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 PPM1EQ8WY54 764 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 MSRAQ9UJ68 235 aa26.01■■□□□ 1.75
SRRT-218ENST00000620394 SDSP20132 328 aa26■■□□□ 1.75
SRRT-218ENST00000620394 SLC4A3P48751 1232 aa26■■□□□ 1.75
SRRT-218ENST00000620394 NKX3-2P78367 333 aa26■■□□□ 1.75
SRRT-218ENST00000620394 FAM133AQ8N9E0 248 aa26■■□□□ 1.75
SRRT-218ENST00000620394 RILPL2Q969X0 211 aa26■■□□□ 1.75
SRRT-218ENST00000620394 ASB2Q96Q27 587 aa26■■□□□ 1.75
SRRT-218ENST00000620394 IL23AQ9NPF7 189 aa26■■□□□ 1.75
SRRT-218ENST00000620394 A1CFQ9NQ94 594 aaKnown RBP26■■□□□ 1.75
SRRT-218ENST00000620394 RNF146Q9NTX7 359 aa26■■□□□ 1.75
SRRT-218ENST00000620394 PRR12Q9ULL5 1215 aa26■■□□□ 1.75
SRRT-218ENST00000620394 ISY1Q9ULR0 285 aaKnown RBP26■■□□□ 1.75
SRRT-218ENST00000620394 MYO9BQ13459 2157 aa26■■□□□ 1.75
SRRT-218ENST00000620394 ACRP10323 421 aa25.99■■□□□ 1.75
SRRT-218ENST00000620394 MFAP1P55081 439 aaKnown RBP25.99■■□□□ 1.75
SRRT-218ENST00000620394 IKQ13123 557 aaPredicted RBP25.99■■□□□ 1.75
SRRT-218ENST00000620394 HERVK_113Q902F9 699 aa25.99■■□□□ 1.75
SRRT-218ENST00000620394 AGBL1Q96MI9 1066 aa25.99■■□□□ 1.75
SRRT-218ENST00000620394 HOMER2Q9NSB8 354 aa25.99■■□□□ 1.75
SRRT-218ENST00000620394 CD4P01730 458 aa25.98■■□□□ 1.75
SRRT-218ENST00000620394 TOP1P11387 765 aaKnown RBP25.98■■□□□ 1.75
SRRT-218ENST00000620394 BTNL9Q6UXG8 535 aa25.98■■□□□ 1.75
SRRT-218ENST00000620394 TBC1D10CQ8IV04 446 aa25.98■■□□□ 1.75
SRRT-218ENST00000620394 CCDC144CPQ8IYA2 1237 aa25.98■■□□□ 1.75
SRRT-218ENST00000620394 ADAMTS19Q8TE59 1207 aa25.98■■□□□ 1.75
SRRT-218ENST00000620394 KATNBL1Q9H079 304 aa25.98■■□□□ 1.75
SRRT-218ENST00000620394 CTAGE5O15320 804 aa25.97■■□□□ 1.75
SRRT-218ENST00000620394 MRPS5P82675 430 aaKnown RBP25.97■■□□□ 1.75
SRRT-218ENST00000620394 RRP12Q5JTH9 1297 aaKnown RBP25.97■■□□□ 1.75
SRRT-218ENST00000620394 TMEM47Q9BQJ4 181 aa25.97■■□□□ 1.75
SRRT-218ENST00000620394 TOMM22Q9NS69 142 aa25.97■■□□□ 1.75
SRRT-218ENST00000620394 CABYRO75952 493 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 CYP2C18P33260 490 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 HAND2P61296 217 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 ADGRE1Q14246 886 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 CCDC96Q2M329 555 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 IL27Q8NEV9 243 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 RANBP17Q9H2T7 1088 aaKnown RBP25.96■■□□□ 1.75
SRRT-218ENST00000620394 HIPK3Q9H422 1215 aa25.96■■□□□ 1.75
SRRT-218ENST00000620394 NT5C2P49902 561 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 CNTN2Q02246 1040 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 MFSD6Q6ZSS7 791 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 SLC43A3Q8NBI5 491 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 CHMP4CQ96CF2 233 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 TRERF1Q96PN7 1200 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 SEZ6LQ9BYH1 1024 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 SLC28A3Q9HAS3 691 aa25.95■■□□□ 1.74
SRRT-218ENST00000620394 ICAM1P05362 532 aa25.94■■□□□ 1.74
SRRT-218ENST00000620394 ALAS1P13196 640 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms