RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SFPQP23246 707 aaKnown RBP eCLIP28.73■■■□□ 2.19
VEGFC-202ENST00000618562 CEP135Q66GS9 1140 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 USP49Q70CQ1 688 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 CCAR2Q8N163 923 aaKnown RBP28.73■■■□□ 2.19
VEGFC-202ENST00000618562 TSC1Q92574 1164 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 UTRNP46939 3433 aa28.72■■■□□ 2.19
VEGFC-202ENST00000618562 A0A1W2PRG0 241 aa28.72■■■□□ 2.19
VEGFC-202ENST00000618562 INF2Q27J81 1249 aa28.72■■■□□ 2.19
VEGFC-202ENST00000618562 MICALL2Q8IY33 904 aa28.72■■■□□ 2.19
VEGFC-202ENST00000618562 SCAF8Q9UPN6 1271 aaKnown RBP28.72■■■□□ 2.19
VEGFC-202ENST00000618562 GJA3Q9Y6H8 435 aa28.72■■■□□ 2.19
VEGFC-202ENST00000618562 POLR2DO15514 142 aaKnown RBP28.71■■■□□ 2.19
VEGFC-202ENST00000618562 NDUFB10O96000 172 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 PTPN14Q15678 1187 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 MIGA2Q7L4E1 593 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 TRIML1Q8N9V2 468 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 DPF2Q92785 391 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 USP27XA6NNY8 438 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 ATP1A3P13637 1013 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 SYCP1Q15431 976 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 ARMCX5Q6P1M9 558 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 GMCL1Q96IK5 515 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 DACH1Q9UI36 760 aa28.71■■■□□ 2.19
VEGFC-202ENST00000618562 KIF2AO00139 706 aaPredicted RBP28.7■■■□□ 2.19
VEGFC-202ENST00000618562 ZBTB5O15062 677 aa28.7■■■□□ 2.19
VEGFC-202ENST00000618562 KRT25Q7Z3Z0 450 aa28.7■■■□□ 2.19
VEGFC-202ENST00000618562 C4orf32Q8N8J7 132 aa28.7■■■□□ 2.19
VEGFC-202ENST00000618562 ZBTB21Q9ULJ3 1066 aa28.7■■■□□ 2.19
VEGFC-202ENST00000618562 ZNF541Q9H0D2 1346 aa28.7■■■□□ 2.18
VEGFC-202ENST00000618562 SARSP49591 514 aaKnown RBP28.7■■■□□ 2.18
VEGFC-202ENST00000618562 UBASH3AP57075 661 aa28.7■■■□□ 2.18
VEGFC-202ENST00000618562 SAMD7Q7Z3H4 446 aa28.7■■■□□ 2.18
VEGFC-202ENST00000618562 MLKLQ8NB16 471 aa28.7■■■□□ 2.18
VEGFC-202ENST00000618562 NUP88Q99567 741 aaPredicted RBP28.7■■■□□ 2.18
VEGFC-202ENST00000618562 SPON1Q9HCB6 807 aa28.7■■■□□ 2.18
VEGFC-202ENST00000618562 MAN1B1Q9UKM7 699 aa28.7■■■□□ 2.18
VEGFC-202ENST00000618562 BMP6P22004 513 aa28.69■■■□□ 2.18
VEGFC-202ENST00000618562 MAP3K10Q02779 954 aa28.69■■■□□ 2.18
VEGFC-202ENST00000618562 RASA3Q14644 834 aa28.69■■■□□ 2.18
VEGFC-202ENST00000618562 CCDC112Q8NEF3 446 aa28.69■■■□□ 2.18
VEGFC-202ENST00000618562 SERTAD1Q9UHV2 236 aa28.69■■■□□ 2.18
VEGFC-202ENST00000618562 CNOT7Q9UIV1 285 aaKnown RBP28.69■■■□□ 2.18
VEGFC-202ENST00000618562 SYNPO2Q9UMS6 1093 aa28.69■■■□□ 2.18
VEGFC-202ENST00000618562 FOXN1O15353 648 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 SERPINC1P01008 464 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 PPP1R18Q6NYC8 613 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 REXO1Q8N1G1 1221 aaKnown RBP28.68■■■□□ 2.18
VEGFC-202ENST00000618562 SMARCE1Q969G3 411 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 CCDC34Q96HJ3 373 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 EPSTI1Q96J88 318 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 VWA3AA6NCI4 1184 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 ACTN4O43707 911 aaKnown RBP28.68■■■□□ 2.18
VEGFC-202ENST00000618562 ECE1P42892 770 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 TNNI2P48788 182 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 ADCY7P51828 1080 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 NONOQ15233 471 aaKnown RBP eCLIP28.68■■■□□ 2.18
VEGFC-202ENST00000618562 IL17AQ16552 155 aa28.68■■■□□ 2.18
VEGFC-202ENST00000618562 BIN2Q9UBW5 565 aaPredicted RBP28.68■■■□□ 2.18
VEGFC-202ENST00000618562 MORC3Q14149 939 aa28.67■■■□□ 2.18
VEGFC-202ENST00000618562 ASTN2O75129 1339 aaPredicted RBP28.66■■■□□ 2.18
VEGFC-202ENST00000618562 TBC1D10BQ4KMP7 808 aaPredicted RBP28.66■■■□□ 2.18
VEGFC-202ENST00000618562 SPATA20Q8TB22 786 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 ACER1Q8TDN7 264 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 ANKRD7Q92527 254 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 SYMPKQ92797 1274 aaKnown RBP28.66■■■□□ 2.18
VEGFC-202ENST00000618562 TEPSINQ96N21 525 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 TMEM260Q9NX78 707 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 DICER1Q9UPY3 1922 aaKnown RBP28.66■■■□□ 2.18
VEGFC-202ENST00000618562 QRICH1Q2TAL8 776 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 JAKMIP3Q5VZ66 844 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 ARL6IP4Q66PJ3 421 aaKnown RBP28.66■■■□□ 2.18
VEGFC-202ENST00000618562 ARHGEF10LQ9HCE6 1279 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 FANCLQ9NW38 375 aa28.66■■■□□ 2.18
VEGFC-202ENST00000618562 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.66■■■□□ 2.18
VEGFC-202ENST00000618562 CAP2P40123 477 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 PDILTQ8N807 584 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 UBE2Q2Q8WVN8 375 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 TMX2Q9Y320 296 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 A0A087X0B3 334 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 TNFAIP1Q13829 316 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 RIC8AQ9NPQ8 531 aa28.65■■■□□ 2.18
VEGFC-202ENST00000618562 ATAD5Q96QE3 1844 aa28.64■■■□□ 2.18
VEGFC-202ENST00000618562 PRR29P0C7W0 189 aa28.64■■■□□ 2.18
VEGFC-202ENST00000618562 BMP3P12645 472 aa28.64■■■□□ 2.18
VEGFC-202ENST00000618562 CDC37Q16543 378 aaPredicted RBP28.64■■■□□ 2.18
VEGFC-202ENST00000618562 VSTM4Q8IW00 320 aa28.64■■■□□ 2.18
VEGFC-202ENST00000618562 SPICE1Q8N0Z3 855 aa28.64■■■□□ 2.18
VEGFC-202ENST00000618562 TMEM60Q9H2L4 133 aa28.64■■■□□ 2.18
VEGFC-202ENST00000618562 KIAA1755Q5JYT7 1200 aa28.63■■■□□ 2.17
VEGFC-202ENST00000618562 E4F1Q66K89 784 aaPredicted RBP28.63■■■□□ 2.17
VEGFC-202ENST00000618562 ENOX1Q8TC92 643 aaKnown RBP28.63■■■□□ 2.17
VEGFC-202ENST00000618562 TRMT1Q9NXH9 659 aaKnown RBP28.63■■■□□ 2.17
VEGFC-202ENST00000618562 KIF4BQ2VIQ3 1234 aa28.63■■■□□ 2.17
VEGFC-202ENST00000618562 CT47A1Q5JQC4 288 aaPredicted RBP28.63■■■□□ 2.17
VEGFC-202ENST00000618562 NEK8Q86SG6 692 aa28.63■■■□□ 2.17
VEGFC-202ENST00000618562 TBCKQ8TEA7 893 aa28.63■■■□□ 2.17
VEGFC-202ENST00000618562 TMEM232C9JQI7 657 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 ARHGAP27Q6ZUM4 889 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 FHDC1Q9C0D6 1143 aaPredicted RBP28.62■■■□□ 2.17
VEGFC-202ENST00000618562 HACL1Q9UJ83 578 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms