RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
SHANK2-221ENST00000618363 PARP1P09874 1014 aaKnown RBP13.68□□□□□ -0.22
SHANK2-221ENST00000618363 GOLGA8HP0CJ92 632 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 RTP1P59025 263 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-221ENST00000618363 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 FAM133AQ8N9E0 248 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 NUP133Q8WUM0 1156 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 ANKS1AQ92625 1134 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 VTI1AQ96AJ9 217 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
SHANK2-221ENST00000618363 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
SHANK2-221ENST00000618363 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 SGSM2O43147 1006 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 C6orf222P0C671 652 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-221ENST00000618363 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-221ENST00000618363 CCDC144BQ3MJ40 725 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 CASC1Q6TDU7 716 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 ENAHQ8N8S7 591 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-221ENST00000618363 PCSK9Q8NBP7 692 aaKnown RBP13.67□□□□□ -0.22
SHANK2-221ENST00000618363 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
SHANK2-221ENST00000618363 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 PRDM5Q9NQX1 630 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-221ENST00000618363 PHF24Q9UPV7 400 aa13.67□□□□□ -0.22
SHANK2-221ENST00000618363 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 IFIT3O14879 490 aaKnown RBP13.66□□□□□ -0.22
SHANK2-221ENST00000618363 CALML3P27482 149 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 BMP8BP34820 402 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-221ENST00000618363 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 PTH1RQ03431 593 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 USH1GQ495M9 461 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 AP5M1Q9H0R1 490 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 IL25Q9H293 177 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 VAT1LQ9HCJ6 419 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 STARD7Q9NQZ5 370 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
SHANK2-221ENST00000618363 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 SYNRGQ9UMZ2 1314 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 ZEB2O60315 1214 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 FXR1P51114 621 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHANK2-221ENST00000618363 MDM2Q00987 491 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-221ENST00000618363 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
SHANK2-221ENST00000618363 KCNA10Q16322 511 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-221ENST00000618363 GNASQ5JWF2 1037 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 EEPD1Q7L9B9 569 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-221ENST00000618363 GDF15Q99988 308 aa13.65□□□□□ -0.22
SHANK2-221ENST00000618363 ABCB11O95342 1321 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 A0A1W2PQ45 241 aaPredicted RBP13.64□□□□□ -0.23
SHANK2-221ENST00000618363 A0A1W2PQY0 241 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 NFIBO00712 420 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 ADAMTS4O75173 837 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 NEFLP07196 543 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 CYP21A2P08686 494 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 ACLYP53396 1101 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 PDE4DQ08499 809 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 TRAF1Q13077 416 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 WTAPQ15007 396 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 C1orf53Q5VUE5 145 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 CCDC136Q96JN2 1154 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 FGD4Q96M96 766 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 MRPL11Q9Y3B7 192 aaKnown RBP13.64□□□□□ -0.23
SHANK2-221ENST00000618363 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
SHANK2-221ENST00000618363 DCDC2CA8MYV0 355 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 E7EWF7 191 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-221ENST00000618363 ALDH5A1P51649 535 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-221ENST00000618363 GJA9P57773 515 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
SHANK2-221ENST00000618363 CYB5R4Q7L1T6 521 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 CATIPQ7Z7H3 387 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 FBXO11Q86XK2 927 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 DNERQ8NFT8 737 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 MAF1Q9H063 256 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 PRO3102Q9H379 93 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
SHANK2-221ENST00000618363 MCM3APO60318 1980 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
SHANK2-221ENST00000618363 KLRF2D3W0D1 207 aa13.62□□□□□ -0.23
SHANK2-221ENST00000618363 DYNC1LI2O43237 492 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-221ENST00000618363 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
SHANK2-221ENST00000618363 ASGR1P07306 291 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms