RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PSDA5PKW4 1024 aaPredicted RBP15.44■□□□□ 0.06
CIITA-213ENST00000618327 EEF2P13639 858 aaKnown RBP15.44■□□□□ 0.06
CIITA-213ENST00000618327 AKR1B1P15121 316 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 HHIPL2Q6UWX4 724 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.44■□□□□ 0.06
CIITA-213ENST00000618327 SLFN14P0C7P3 912 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 UBXN2AP68543 259 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 RAPGEF1Q13905 1077 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.44■□□□□ 0.06
CIITA-213ENST00000618327 ANTXR2P58335 489 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 CYP4A11Q02928 519 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 NCAPG2Q86XI2 1143 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 MYOCDQ8IZQ8 938 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 MXD3Q9BW11 206 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 OSBPL5Q9H0X9 879 aaPredicted RBP15.44■□□□□ 0.06
CIITA-213ENST00000618327 LZTFL1Q9NQ48 299 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 ZBTB5O15062 677 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 CDC25AP30304 524 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 FAM107BQ9H098 131 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 KIAA1024Q9UPX6 916 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 TACC1O75410 805 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 ERCC3P19447 782 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 LRCH2Q5VUJ6 765 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
CIITA-213ENST00000618327 OTUD6AQ7L8S5 288 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 PRPF4BQ13523 1007 aaKnown RBP15.43■□□□□ 0.06
CIITA-213ENST00000618327 OXER1Q8TDS5 423 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 DRC1Q96MC2 740 aa15.43■□□□□ 0.06
CIITA-213ENST00000618327 STRN3Q13033 797 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 LARP4BQ92615 738 aaKnown RBP15.42■□□□□ 0.06
CIITA-213ENST00000618327 FNBP1Q96RU3 617 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 GUCA1BQ9UMX6 200 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 HARSP12081 509 aaKnown RBP15.42■□□□□ 0.06
CIITA-213ENST00000618327 SNAP25P60880 206 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 BRDTQ58F21 947 aaPredicted RBP15.42■□□□□ 0.06
CIITA-213ENST00000618327 NUP58Q9BVL2 599 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 HERC5Q9UII4 1024 aaKnown RBP15.42■□□□□ 0.06
CIITA-213ENST00000618327 GPR75-ASB3A0A0A6YYF3 556 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 MCM3P25205 808 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 PANK4Q9NVE7 773 aa15.42■□□□□ 0.06
CIITA-213ENST00000618327 EXOC3O60645 756 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 MORC3Q14149 939 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 DPCR1Q3MIW9 517 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 SPECC1LQ69YQ0 1117 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 RCSD1Q6JBY9 416 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 CLEC17AQ6ZS10 378 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 EPSTI1Q96J88 318 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 LTN1O94822 1766 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 F5H6K3 240 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 SRGNP10124 158 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 DPEP1P16444 411 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 KRT9P35527 623 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 KLRC3Q07444 240 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 BMS1Q14692 1282 aaKnown RBP15.41■□□□□ 0.06
CIITA-213ENST00000618327 PTPREP23469 700 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 FAM26FQ5R3K3 315 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 SPATA1Q5VX52 437 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 CCDC84Q86UT8 332 aaPredicted RBP15.41■□□□□ 0.06
CIITA-213ENST00000618327 FMNL3Q8IVF7 1028 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 GLG1Q92896 1179 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 KCNB2Q92953 911 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 SLC39A2Q9NP94 309 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 MACROD2A1Z1Q3 448 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 FAM83BQ5T0W9 1011 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 PTF1AQ7RTS3 328 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 GRAMD1CQ8IYS0 662 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 IPO4Q8TEX9 1081 aaKnown RBP15.41■□□□□ 0.06
CIITA-213ENST00000618327 ZNF577Q9BSK1 485 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 NAA15Q9BXJ9 866 aaKnown RBP15.41■□□□□ 0.06
CIITA-213ENST00000618327 ANO3Q9BYT9 981 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
CIITA-213ENST00000618327 USP17L10C9JJH3 530 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 IREB2P48200 963 aaKnown RBP15.4■□□□□ 0.06
CIITA-213ENST00000618327 BIRC3Q13489 604 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 LONRF3Q496Y0 759 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 CTAGE9A4FU28 777 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 KCNJ18B7U540 433 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 PPP4CP60510 307 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 KCNJ12Q14500 433 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 COL4A3BPQ9Y5P4 624 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 HOXA13P31271 388 aaPredicted RBP15.4■□□□□ 0.06
CIITA-213ENST00000618327 SPON1Q9HCB6 807 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 BARHL2Q9NY43 387 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 PCDHB13Q9Y5F0 798 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 GUCY1A2P33402 732 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 XKR9Q5GH70 373 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 CYP26C1Q6V0L0 522 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 ARMC9Q7Z3E5 817 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 SRBD1Q8N5C6 995 aaKnown RBP15.4■□□□□ 0.06
CIITA-213ENST00000618327 MTMR4Q9NYA4 1195 aa15.4■□□□□ 0.06
CIITA-213ENST00000618327 A0A087WWV3 80 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms