RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	ALAD	P13716	330 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	CDK17	Q00537	523 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	LRP10	Q7Z4F1	713 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	PARD3B	Q8TEW8	1205 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	BORCS6	Q96GS4	357 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	SEC16B	Q96JE7	1060 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	PAIP2	Q9BPZ3	127 aa	Known RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	PLCD4	Q9BRC7	762 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	NOP53	Q9NZM5	478 aa	Known RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	SLC12A6	Q9UHW9	1150 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	CAPN11	Q9UMQ6	739 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	DOT1L	Q8TEK3	1739 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	BCL9	O00512	1426 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	RNF225	M0QZC1	329 aa	Predicted RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	ABLIM1	O14639	778 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	RPSA	P08865	295 aa	Known RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	BIRC3	Q13489	604 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	ITPK1	Q13572	414 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	TTF1	Q15361	905 aa	Predicted RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	IMMT	Q16891	758 aa	Known RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	KIAA0753	Q2KHM9	967 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	POTEA	Q6S8J7	498 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	AMIGO3	Q86WK7	504 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	PIK3R5	Q8WYR1	880 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	JADE2	Q9NQC1	790 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	GJB4	Q9NTQ9	266 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	RWDD2A	Q9UIY3	292 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	TRPC5	Q9UL62	973 aa	Predicted RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	CEP131	Q9UPN4	1083 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	ZBTB1	Q9Y2K1	713 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	THRAP3	Q9Y2W1	955 aa	Known RBP	11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	KCP	Q6ZWJ8	1503 aa		11.9	□□□□□ -0.5
CPEB1-215	ENST00000617958	NWD2	Q9ULI1	1742 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	IFIT3	O14879	490 aa	Known RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	RTN3	O95197	1032 aa	Predicted RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	CD44	P16070	742 aa	Known RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	LMNB2	Q03252	620 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	BLMH	Q13867	455 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	TRIM29	Q14134	588 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	ACCSL	Q4AC99	568 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	RILPL1	Q5EBL4	403 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	KCTD16	Q68DU8	428 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	HDAC7	Q8WUI4	952 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	ZFAND2B	Q8WV99	257 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCDC43	Q96MW1	224 aa	Known RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	NUP58	Q9BVL2	599 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	TMBIM4	Q9HC24	238 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	LEMD3	Q9Y2U8	911 aa		11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958	LUC7L2	Q9Y383	392 aa	Known RBP	11.9	□□□□□ -0.51
CPEB1-215	ENST00000617958		A6NHS1	94 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958		H7C1W4	665 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	ZNF185	O15231	689 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	FER	P16591	822 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	CCNG1	P51959	295 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	NOSTRIN	Q8IVI9	506 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	HVCN1	Q96D96	273 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	HYOU1	Q9Y4L1	999 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	SKAP2	O75563	359 aa	Predicted RBP	11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	TCP11X2	Q5H9J9	407 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	C8orf74	Q6P047	294 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	RETREG2	Q8NC44	543 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	NCOA7	Q8NI08	942 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	PLCB1	Q9NQ66	1216 aa		11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.89	□□□□□ -0.51
CPEB1-215	ENST00000617958	MAST3	O60307	1309 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	GOLGA6L10	A6NI86	522 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	TACC1	O75410	805 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	AP1G2	O75843	785 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	ANP32D	O95626	131 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	DDX58	O95786	925 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	SSB	P05455	408 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	HSPA9	P38646	679 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	ROR2	Q01974	943 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	DPYD	Q12882	1025 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	MYO1E	Q12965	1108 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	BYSL	Q13895	437 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	ZNF268	Q14587	947 aa	Predicted RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	EZH2	Q15910	746 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	CDC37	Q16543	378 aa	Predicted RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	SPRED3	Q2MJR0	410 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	CWF19L1	Q69YN2	538 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	WDR59	Q6PJI9	974 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	SLC30A9	Q6PML9	568 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	CHST3	Q7LGC8	479 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	TEX9	Q8N6V9	391 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	STAMBPL1	Q96FJ0	436 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	SWAP70	Q9UH65	585 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	SLC12A4	Q9UP95	1085 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	TBC1D2B	Q9UPU7	963 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	ABCC12	Q96J65	1359 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	TRIM37	O94972	964 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	PAFAH1B1	P43034	410 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	GCLC	P48506	637 aa	Predicted RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	KIF5A	Q12840	1032 aa		11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	DDX46	Q7L014	1031 aa	Known RBP	11.88	□□□□□ -0.51
CPEB1-215	ENST00000617958	SYNE4	Q8N205	404 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms