RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 MRPL11Q9Y3B7 192 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 ABCB11O95342 1321 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 STK36Q9NRP7 1315 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 MAPK4P31152 587 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 LACTBP83111 547 aaPredicted RBP18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 ZNF296Q8WUU4 475 aaPredicted RBP18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 CLEC4DQ8WXI8 215 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 AIFM3Q96NN9 605 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 ARHGAP39Q9C0H5 1083 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 FOXD4L1Q9NU39 408 aa18.02■□□□□ 0.48
PCDHGC3-204ENST00000617222 PARP14Q460N5 1801 aa18.02■□□□□ 0.47
PCDHGC3-204ENST00000617222 FOXN1O15353 648 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 CTGFP29279 349 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 PSMC4P43686 418 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 HMGN5P82970 282 aaKnown RBP18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 KIF22Q14807 665 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 GPR142Q7Z601 462 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 PLEKHH3Q7Z736 793 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 BARHL2Q9NY43 387 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 FBXO40Q9UH90 709 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 SMC3Q9UQE7 1217 aa18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
PCDHGC3-204ENST00000617222 STXBP3O00186 592 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 NFIBO00712 420 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 HSPA8P11142 646 aaKnown RBP18■□□□□ 0.47
PCDHGC3-204ENST00000617222 NAPAP54920 295 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 FCGRTP55899 365 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 BECN1Q14457 450 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 CD99L2Q8TCZ2 262 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 WASF1Q92558 559 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 TBC1D5Q92609 795 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 ALG1Q9BT22 464 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 VPS54Q9P1Q0 977 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 A0A0G2JMZ2 1700 aa18■□□□□ 0.47
PCDHGC3-204ENST00000617222 hCG_1984214I3L0E3 225 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 TNPO2O14787 897 aaKnown RBP17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 PTPREP23469 700 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 FOSBP53539 338 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 CAP1Q01518 475 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 NSMFQ6X4W1 530 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 ZNF713Q8N859 430 aaPredicted RBP17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 ERO1AQ96HE7 468 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 TRIM47Q96LD4 638 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 MMP19Q99542 508 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 IVNS1ABPQ9Y6Y0 642 aa17.99■□□□□ 0.47
PCDHGC3-204ENST00000617222 SMCO2A6NFE2 343 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 OPLAHO14841 1288 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 STRNO43815 780 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 HSP90AA1P07900 732 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 FCER1AP12319 257 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 GJB2P29033 226 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 CTCFP49711 727 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 KCTD2Q14681 263 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 MCF2L2Q86YR7 1114 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 PSTPIP2Q9H939 334 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 SH3GLB2Q9NR46 395 aa17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 COL11A1P12107 1806 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-204ENST00000617222 CFBP00751 764 aa17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 LBX1P52954 281 aa17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 BAATQ14032 418 aaPredicted RBP17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 PPP1R18Q6NYC8 613 aa17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 RNF207Q6ZRF8 634 aa17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 CCDC12Q8WUD4 166 aaPredicted RBP17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 A1CFQ9NQ94 594 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 GJB4Q9NTQ9 266 aa17.97■□□□□ 0.47
PCDHGC3-204ENST00000617222 SLC15A5A6NIM6 579 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 POLR2MP0CAP2 368 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 XBP1P17861 261 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 CALML3P27482 149 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 NLRP5P59047 1200 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 CCDC148Q8NFR7 591 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 GJD2Q9UKL4 321 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 KCNJ14Q9UNX9 436 aa17.96■□□□□ 0.47
PCDHGC3-204ENST00000617222 CEP350Q5VT06 3117 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 SMCHD1A6NHR9 2005 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 COBLO75128 1261 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 PGK2P07205 417 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 HOXD10P28358 340 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 ADORA2AP29274 412 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 ADCY7P51828 1080 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 MRPL12P52815 198 aaKnown RBP17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 RPS6P62753 249 aaKnown RBP17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 GRB14Q14449 540 aa17.95■□□□□ 0.46
PCDHGC3-204ENST00000617222 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms