RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 PCDHA12Q9UN75 941 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 MED23Q9ULK4 1368 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 EXOC3L4Q17RC7 722 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 CCHCR1Q8TD31 782 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 TXLNGQ9NUQ3 528 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 DNMT1P26358 1616 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ANKRD65E5RJM6 399 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 A1BGP04217 495 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 SERPINB6P35237 376 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 CYP2J2P51589 502 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 PPP2R5DQ14738 602 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 FAM133BQ5BKY9 247 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 APOA5Q6Q788 366 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 CLEC17AQ6ZS10 378 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 USP17L12C9JPN9 530 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 USP17L21D6R901 530 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 EIF3BP55884 814 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 CAPN12Q6ZSI9 719 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 P2RX5Q93086 422 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 NOVA2Q9UNW9 492 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 PLTPP55058 493 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 NGLY1Q96IV0 654 aa11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLTCL1-209ENST00000617103 PPFIA2O75334 1257 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 LARGE1O95461 756 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 LMNB1P20700 586 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 CXCR5P32302 372 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 MAN2A1Q16706 1144 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 CCDC93Q567U6 631 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 ZMYM1Q5SVZ6 1142 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 ZNF658Q5TYW1 1059 aaPredicted RBP11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 SMYD4Q8IYR2 804 aaPredicted RBP11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 PBKQ96KB5 322 aa11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 NOP53Q9NZM5 478 aaKnown RBP11.65□□□□□ -0.55
CLTCL1-209ENST00000617103 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 RWDD2AQ9UIY3 292 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 ZNF148Q9UQR1 794 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 UIMC1Q96RL1 719 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 RNF26Q9BY78 433 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 COBLO75128 1261 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 DDAH1O94760 285 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 HSPA6P17066 643 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 SLC12A2P55011 1212 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 LMNB2Q03252 620 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 TPH2Q8IWU9 490 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 POC1B-GALNT4F8VUJ3 575 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 POLE2P56282 527 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 SIRT2Q8IXJ6 389 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 NEK9Q8TD19 979 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 TUBB6Q9BUF5 446 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 KCNG1Q9UIX4 513 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 COL4A3BPQ9Y5P4 624 aa11.64□□□□□ -0.55
CLTCL1-209ENST00000617103 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 FAM170AA1A519 330 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 TTC36A6NLP5 189 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 LAD1O00515 517 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 MYL1P05976 194 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 ATF7P17544 494 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 TNNI1P19237 187 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 PDCLQ13371 301 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 NAA30Q147X3 362 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 DDB1Q16531 1140 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 PLA2G4DQ86XP0 818 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 PNMA1Q8ND90 353 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 EYA3Q99504 573 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 NHEJ1Q9H9Q4 299 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 MFAP3LO75121 409 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 MOCS3O95396 460 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 BFSP1Q12934 665 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 HADHQ16836 314 aaKnown RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 LRRC23Q53EV4 343 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 ZNF589Q86UQ0 364 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 IL17REQ8NFR9 667 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 SH3BP5O60239 455 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 PDE6CP51160 858 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 GRAMD1CQ8IYS0 662 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 CABLES1Q8TDN4 633 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 STMN1P16949 149 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 ZBTB17Q13105 803 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms