RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 TKFCQ3LXA3 575 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 WDR78Q5VTH9 848 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 FBXO11Q86XK2 927 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 HOMER1Q86YM7 354 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 PIBF1Q8WXW3 757 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 RIPK3Q9Y572 518 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 CPLX1O14810 134 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 ALAS1P13196 640 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 HOXD10P28358 340 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 MCM2P49736 904 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 TRAF1Q13077 416 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 PLEKHH3Q7Z736 793 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 COA7Q96BR5 231 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 AMNQ9BXJ7 453 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 ARHGAP39Q9C0H5 1083 aa18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 V9GY48 417 aaPredicted RBP18.97■□□□□ 0.63
SPTSSB-204ENST00000617024 BAZ2BQ9UIF8 2168 aaKnown RBP18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 TNPO2O14787 897 aaKnown RBP18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 STRNO43815 780 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 GNRH1P01148 92 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 CTGFP29279 349 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 AKAP17AQ02040 695 aaKnown RBP18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 FUT2Q10981 343 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 SCRN1Q12765 414 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 GPR142Q7Z601 462 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 SH3TC2Q8TF17 1288 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 TRIM47Q96LD4 638 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 TRERF1Q96PN7 1200 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 FBXO40Q9UH90 709 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 IVNS1ABPQ9Y6Y0 642 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 A0A0G2JMZ2 1700 aa18.96■□□□□ 0.63
SPTSSB-204ENST00000617024 IFNAR1P17181 557 aa18.95■□□□□ 0.62
SPTSSB-204ENST00000617024 NTRK3Q16288 839 aa18.95■□□□□ 0.62
SPTSSB-204ENST00000617024 USH1GQ495M9 461 aa18.95■□□□□ 0.62
SPTSSB-204ENST00000617024 NECAB1Q8N987 351 aa18.95■□□□□ 0.62
SPTSSB-204ENST00000617024 SH2B1Q9NRF2 756 aaPredicted RBP18.95■□□□□ 0.62
SPTSSB-204ENST00000617024 HOMER2Q9NSB8 354 aa18.95■□□□□ 0.62
SPTSSB-204ENST00000617024 PRPF3O43395 683 aaKnown RBP18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 CDKL5O76039 1030 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 LARGE1O95461 756 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 FCER1AP12319 257 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 PTPREP23469 700 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 SSRP1Q08945 709 aaKnown RBP18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 CHRDL2Q6WN34 429 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 GTF3C6Q969F1 213 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 SHISA4Q96DD7 197 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 RNF146Q9NTX7 359 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 MRPL11Q9Y3B7 192 aaKnown RBP18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 PCDHA1Q9Y5I3 950 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 ABCB11O95342 1321 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 CNTNAP5Q8WYK1 1306 aa18.94■□□□□ 0.62
SPTSSB-204ENST00000617024 hCG_1642624A0A1W2PR95 340 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 SLC15A5A6NIM6 579 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 TRIM22Q8IYM9 498 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 ABRAQ8N0Z2 381 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 PHKBQ93100 1093 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 MMP19Q99542 508 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 SLC26A6Q9BXS9 759 aa18.93■□□□□ 0.62
SPTSSB-204ENST00000617024 PPP1R11O60927 126 aaPredicted RBP18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 CD2BP2O95400 341 aaKnown RBP18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 KCTD2Q14681 263 aa18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 ANKRD35Q8N283 1001 aa18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 NUDT12Q9BQG2 462 aa18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 RNF26Q9BY78 433 aaPredicted RBP18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 GJD2Q9UKL4 321 aa18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 MYH6P13533 1939 aa18.92■□□□□ 0.62
SPTSSB-204ENST00000617024 MGAMO43451 1857 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 TAL1P17542 331 aaPredicted RBP18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 PRMT2P55345 433 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 MORN1Q5T089 497 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 MCF2L2Q86YR7 1114 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 CCDC83Q8IWF9 413 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 SRRDQ9UH36 339 aa18.91■□□□□ 0.62
SPTSSB-204ENST00000617024 SMCHD1A6NHR9 2005 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 GRB14Q14449 540 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 MTFR1Q15390 333 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 PFKFB3Q16875 520 aaPredicted RBP18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 HEATR3Q7Z4Q2 680 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 DPP9Q86TI2 863 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 RGS22Q8NE09 1264 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 SOCS4Q8WXH5 440 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 TMX3Q96JJ7 454 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 MAF1Q9H063 256 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 SLC5A4Q9NY91 659 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 GABRQQ9UN88 632 aa18.9■□□□□ 0.62
SPTSSB-204ENST00000617024 DEXIO95424 95 aa18.89■□□□□ 0.61
SPTSSB-204ENST00000617024 CTDNEP1O95476 244 aa18.89■□□□□ 0.61
SPTSSB-204ENST00000617024 SCG2P13521 617 aa18.89■□□□□ 0.61
SPTSSB-204ENST00000617024 ADORA2AP29274 412 aa18.89■□□□□ 0.61
SPTSSB-204ENST00000617024 RGS2P41220 211 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms