RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 PTPROQ16827 1216 aa12.72□□□□□ -0.37
AP003900.1-202ENST00000616952 ZNF792Q3KQV3 632 aa12.72□□□□□ -0.37
AP003900.1-202ENST00000616952 TCEAL5Q5H9L2 206 aa12.72□□□□□ -0.37
AP003900.1-202ENST00000616952 BANK1Q8NDB2 785 aa12.72□□□□□ -0.37
AP003900.1-202ENST00000616952 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
AP003900.1-202ENST00000616952 SIP14410 1827 aa12.72□□□□□ -0.37
AP003900.1-202ENST00000616952 TNKSO95271 1327 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 BAIAP3O94812 1187 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 RFC2P35250 354 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 LTBRP36941 435 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 KCNJ6P48051 423 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 GNAI1P63096 354 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 ITGA7Q13683 1181 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 CXCL17Q6UXB2 119 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 TMCO2Q7Z6W1 182 aaPredicted RBP12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 RPAINQ86UA6 219 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 LPIN2Q92539 896 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 MMP19Q99542 508 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 DENND2AQ9ULE3 1009 aa12.71□□□□□ -0.37
AP003900.1-202ENST00000616952 COL11A1P12107 1806 aaPredicted RBP12.71□□□□□ -0.38
AP003900.1-202ENST00000616952 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 SEMA3EO15041 775 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 CTAGE5O15320 804 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 PDGFBP01127 241 aaPredicted RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 GH2P01242 217 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 MB21D1Q8N884 522 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 ABCF2Q9UG63 623 aa12.7□□□□□ -0.38
AP003900.1-202ENST00000616952 PTPRSQ13332 1948 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 CABYRO75952 493 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 WDR5P61964 334 aaKnown RBP12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 COG2Q14746 738 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 SIL1Q9H173 461 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 NSUN3Q9H649 340 aaKnown RBP12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
AP003900.1-202ENST00000616952 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 LOC730098B7Z3J9 87 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 SNAI1O95863 264 aaPredicted RBP12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 CYP2C9P11712 490 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 BEX3Q00994 111 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 MECOMQ03112 1051 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 C6orf132Q5T0Z8 1188 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 TMEM105Q8N8V8 129 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 ACER1Q8TDN7 264 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 SUCLG2Q96I99 432 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 RAD9AQ99638 391 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 TANGO6Q9C0B7 1094 aa12.68□□□□□ -0.38
AP003900.1-202ENST00000616952 SPTBN2O15020 2390 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 SCN5AQ14524 2016 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 MAST4O15021 2626 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 GJB5O95377 273 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 NKX3-2P78367 333 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 DLX2Q07687 328 aaPredicted RBP12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 CBX2Q14781 532 aaPredicted RBP12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 CTC1Q2NKJ3 1217 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 ALDH8A1Q9H2A2 487 aaPredicted RBP12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
AP003900.1-202ENST00000616952 CDK5RAP2Q96SN8 1893 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 NCK2O43639 380 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 SLC25A27O95847 323 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 PHKA1P46020 1223 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 DEFB103AP81534 67 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 LAPTM4BQ86VI4 370 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 FOXP4Q8IVH2 680 aaPredicted RBP12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 RIPOR3Q96MK2 946 aa12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 ASH1LQ9NR48 2969 aaKnown RBP12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 TRMT13Q9NUP7 481 aaKnown RBP12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 FLNBO75369 2602 aaKnown RBP12.66□□□□□ -0.38
AP003900.1-202ENST00000616952 TBX10O75333 385 aa12.65□□□□□ -0.38
AP003900.1-202ENST00000616952 PSMC6P62333 389 aa12.65□□□□□ -0.38
AP003900.1-202ENST00000616952 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
AP003900.1-202ENST00000616952 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
AP003900.1-202ENST00000616952 RSPO4Q2I0M5 234 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms