RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 EPB41P11171 864 aaKnown RBP14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 CYP4A11Q02928 519 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 IFI16Q16666 785 aaKnown RBP14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 CC2D2BQ6DHV5 1058 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 PP2D1A8MPX8 630 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 GCNT3O95395 438 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 MAGEA1P43355 309 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 GRIN1Q05586 938 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 TROAPQ12815 778 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 FAM26FQ5R3K3 315 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 TYW1BQ6NUM6 668 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 MYCT1Q8N699 235 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 MRPL44Q9H9J2 332 aaKnown RBP14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 ARHGEF35A5YM69 484 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 B4DLN1 442 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 KMT5BQ4FZB7 885 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 NSMFQ6X4W1 530 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 MAGEF1Q9HAY2 307 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 PANK4Q9NVE7 773 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 OGFRQ9NZT2 677 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 MYCLP12524 364 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 CRKP46108 304 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 LRRC41Q15345 812 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 NALCNQ8IZF0 1738 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 CNOT6LQ96LI5 555 aaKnown RBP14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 BARHL2Q9NY43 387 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 RWDD2AQ9UIY3 292 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 P2RX5Q93086 422 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 PNMA6FA0A0J9YX94 578 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 ATP2C1P98194 919 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 NTRK3Q16288 839 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 SP8Q8IXZ3 490 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 DHTKD1Q96HY7 919 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 SPTLC3Q9NUV7 552 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 GAS7O60861 476 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 FBXL16Q8N461 479 aa14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 EPN1Q9Y6I3 576 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3B-206ENST00000616407 hCG_1984214I3L0E3 225 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 RXRBP28702 533 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 SLC9C1Q4G0N8 1177 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 ZNF772Q68DY9 489 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 ZNF713Q8N859 430 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 OSBPL5Q9H0X9 879 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 FRMD4BQ9Y2L6 1034 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 AKR1B1P15121 316 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 PODNQ7Z5L7 613 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 SLFN12Q8IYM2 578 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 FNBP4Q8N3X1 1017 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 DPF2Q92785 391 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 TSGA10Q9BZW7 698 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 TMEM260Q9NX78 707 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 CALUO43852 315 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 SNAP25P60880 206 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 TUBB4BP68371 445 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 KRT31Q15323 416 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 PSMB7Q99436 277 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
PPP4R3B-206ENST00000616407 SOWAHDA6NJG2 315 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP27XA6NNY8 438 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 EEF1GP26641 437 aaKnown RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 PTPAQ15257 358 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 SECISBP2LQ93073 1101 aaKnown RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 TDRD3Q9H7E2 651 aaKnown RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 DAGLAQ9Y4D2 1042 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 SPATA31A6Q5VVP1 1343 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 BACH1O14867 736 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 BMP3P12645 472 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 HSPA1LP34931 641 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 BAG6P46379 1132 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 PABPC4Q13310 644 aaKnown RBP eCLIP14.64□□□□□ -0.077e-7■■□□□ 13.3
PPP4R3B-206ENST00000616407 TUBE1Q9UJT0 475 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 SETD1AO15047 1707 aaKnown RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 FOSP01100 380 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 MYL1P05976 194 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 FLT1P17948 1338 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 AP5Z1O43299 807 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 C21orf2O43822 256 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 UBXN2AP68543 259 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 CLEC10AQ8IUN9 316 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 FOXP4Q8IVH2 680 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 CRAMP1Q96RY5 1269 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 CACNA1FO60840 1977 aa14.64□□□□□ -0.07
PPP4R3B-206ENST00000616407 PHACTR2O75167 634 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 GCFC2P16383 781 aaKnown RBP14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 CCNE1P24864 410 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 LMAN1P49257 510 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 PRKG1Q13976 671 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 CDC37Q16543 378 aaPredicted RBP14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 MCTP2Q6DN12 878 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 IFIH1Q9BYX4 1025 aaKnown RBP14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 PICK1Q9NRD5 415 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 STK24Q9Y6E0 443 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 RASA1P20936 1047 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms