RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 F6X3S4 739 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 HTR3BO95264 441 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 VAMP1P23763 118 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 EIF4A3P38919 411 aaKnown RBP4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 FAM160A1Q05DH4 1040 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 NMIQ13287 307 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 BBS9Q3SYG4 887 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 LIMS2Q7Z4I7 341 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 ZNF655Q8N720 491 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 NUP43Q8NFH3 380 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 CHFRQ96EP1 664 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 ASCC2Q9H1I8 757 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 CD248Q9HCU0 757 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 GGT7Q9UJ14 662 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 GPR55Q9Y2T6 319 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 POLR3KQ9Y2Y1 108 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 CORINQ9Y5Q5 1042 aa4.4□□□□□ -1.71
HMGB1P24-202ENST00000615653 A0A1W2PQ45 241 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 A0A1W2PQY0 241 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 SSU72P8A0A1W2PR75 194 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 MINDY4BA8MYZ0 360 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 GREM1O60565 184 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 ATE1O95260 518 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 ICAM4Q14773 271 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 FBXL19Q6PCT2 694 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 LGI4Q8N135 537 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 TMEM87AQ8NBN3 555 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 COPRSQ9NQ92 184 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 DLL4Q9NR61 685 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 SPATA6Q9NWH7 488 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 NTMQ9P121 344 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 PLA2G2DQ9UNK4 145 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 INVSQ9Y283 1065 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 FAN1Q9Y2M0 1017 aa4.39□□□□□ -1.71
HMGB1P24-202ENST00000615653 UPK3BL1B0FP48 263 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 UPK3BL2E5RIL1 263 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 ZNF76P36508 570 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 CEBPAP49715 358 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 NANOS3P60323 173 aaKnown RBP4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 KRTAP10-9P60411 292 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 B3GNT8Q7Z7M8 397 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 REXO1Q8N1G1 1221 aaKnown RBP4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 ADAMTS17Q8TE56 1095 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 ZNF296Q8WUU4 475 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 CCDC74BQ96LY2 380 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 GMIPQ9P107 970 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 KLHL3Q9UH77 587 aa4.38□□□□□ -1.71
HMGB1P24-202ENST00000615653 TLR3O15455 904 aaKnown RBP4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 FKTNO75072 461 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 SYPP08247 313 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 NCAM1P13591 858 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 TNNI2P48788 182 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 CHMP4BP1P59074 171 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 RNF4P78317 190 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 CDCP2Q5VXM1 449 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 KIAA0825Q8IV33 1275 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 PHACTR4Q8IZ21 702 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 NT5C1AQ9BXI3 368 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 EHMT1Q9H9B1 1298 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 ADAMTS1Q9UHI8 967 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 ZNF536O15090 1300 aa4.37□□□□□ -1.71
HMGB1P24-202ENST00000615653 RGS13O14921 159 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 CCNFP41002 786 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 ZNF165P49910 485 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 RAD51AP2Q09MP3 1159 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 APOBRQ0VD83 1088 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 KIAA2012Q0VF49 1180 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 LRRFIP1Q32MZ4 808 aaKnown RBP4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 PAQR3Q6TCH7 311 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 SLITRK4Q8IW52 837 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 FBXO27Q8NI29 283 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 CEP89Q96ST8 783 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 BRMS1Q9HCU9 246 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 IMPACTQ9P2X3 320 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 PCDHB14Q9Y5E9 798 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 HCFC2Q9Y5Z7 792 aa4.36□□□□□ -1.71
HMGB1P24-202ENST00000615653 MEIS3P2A8K0S8 358 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 CHURC1-FNTBB4DL54 471 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 SCAMP3O14828 347 aaKnown RBP4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 SRGAP3O43295 1099 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 CYBBP04839 570 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 DBHP09172 617 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 IMPDH2P12268 514 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 RAG1P15918 1043 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 GBP1P32455 592 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 MC3RP41968 323 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 FANCCQ00597 558 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 R3HDM1Q15032 1099 aaKnown RBP4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 LDLRAD1Q5T700 205 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 TTLL7Q6ZT98 887 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 USP48Q86UV5 1035 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 DNERQ8NFT8 737 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 NKD1Q969G9 470 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 SPON2Q9BUD6 331 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 ERVK13-1Q9NX77 482 aa4.35□□□□□ -1.71
HMGB1P24-202ENST00000615653 DNAJA2O60884 412 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 RECKO95980 971 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 ASGR2P07307 311 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 LMO1P25800 156 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms