RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 CNTN3Q9P232 1028 aa9.98□□□□□ -0.81
CCL3-205ENST00000613928 CYP46A1Q9Y6A2 500 aa9.98□□□□□ -0.81
CCL3-205ENST00000613928 DOCK2Q92608 1830 aa9.98□□□□□ -0.81
CCL3-205ENST00000613928 TCRBV5S4A2TA0A5A2 114 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 SIN3BO75182 1162 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 HOXD8P13378 290 aaPredicted RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 PDE6AP16499 860 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 ZNF16P17020 682 aaPredicted RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 PSMA5P28066 241 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 GYG1P46976 350 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 PLAURQ03405 335 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 GRAPQ13588 217 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 PCSK7Q16549 785 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 STOX1Q6ZVD7 989 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 DHX32Q7L7V1 743 aaKnown RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 SLC51AQ86UW1 340 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 FAM84BQ96KN1 310 aaPredicted RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCL3-205ENST00000613928 ANKRD2Q9GZV1 360 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 ALDH8A1Q9H2A2 487 aaPredicted RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 CWC22Q9HCG8 908 aaKnown RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 ZNF532Q9HCE3 1301 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 IRS2Q9Y4H2 1338 aa9.97□□□□□ -0.81
CCL3-205ENST00000613928 COL1A1P02452 1464 aaPredicted RBP9.97□□□□□ -0.81
CCL3-205ENST00000613928 NPHP1O15259 732 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 GPAA1O43292 621 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 IDH1O75874 414 aaKnown RBP9.96□□□□□ -0.82
CCL3-205ENST00000613928 LARGE1O95461 756 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 MMP10P09238 476 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 RPS6KB1P23443 525 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 KLRK1P26718 216 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 ADH6P28332 368 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 KRT32Q14532 448 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 CRY2Q49AN0 593 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 SLC9C2Q5TAH2 1124 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 TTLL5Q6EMB2 1281 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 BLOC1S2Q6QNY1 142 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 ARHGAP27Q6ZUM4 889 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 TNPO1Q92973 898 aaKnown RBP9.96□□□□□ -0.82
CCL3-205ENST00000613928 INTS4Q96HW7 963 aaKnown RBP9.96□□□□□ -0.82
CCL3-205ENST00000613928 LIMCH1Q9UPQ0 1083 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 ARFGEF1Q9Y6D6 1849 aa9.96□□□□□ -0.82
CCL3-205ENST00000613928 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
CCL3-205ENST00000613928 MCM4P33991 863 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 NRLP54845 237 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 ST5P78524 1137 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 ST3GAL1Q11201 340 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
CCL3-205ENST00000613928 TCEANC2Q96MN5 208 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 NEK1Q96PY6 1258 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
CCL3-205ENST00000613928 NRXN2Q9P2S2 1712 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 C10orf71Q711Q0 1435 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 E7EWF7 191 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 EREGO14944 169 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 EDN3P14138 238 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 HOXA10P31260 410 aaPredicted RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 PCBP4P57723 403 aaKnown RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 GPLD1P80108 840 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 SRSF11Q05519 484 aaKnown RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 MAP3K12Q12852 859 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 HYAL2Q12891 473 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 PKP1Q13835 747 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 ME3Q16798 604 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 CAVIN4Q5BKX8 364 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 TXNRD3Q86VQ6 643 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 NLGN1Q8N2Q7 840 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 MAGEB6Q8N7X4 407 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 TRPM4Q8TD43 1214 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 RPGRQ92834 1020 aaKnown RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 CCDC74AQ96AQ1 378 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 STRBPQ96SI9 672 aaKnown RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 GNL3LQ9NVN8 582 aaKnown RBP9.94□□□□□ -0.82
CCL3-205ENST00000613928 TPCN1Q9ULQ1 816 aa9.94□□□□□ -0.82
CCL3-205ENST00000613928 LAMA4Q16363 1823 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 FGAP02671 866 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 DPEP1P16444 411 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 PRELPP51888 382 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 NUCB2P80303 420 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 GPSM2P81274 684 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 EXOSC10Q01780 885 aaKnown RBP9.93□□□□□ -0.82
CCL3-205ENST00000613928 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 GALNT12Q8IXK2 581 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 JMYQ8N9B5 988 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 TNFRSF25Q93038 417 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 RBM17Q96I25 401 aaKnown RBP9.93□□□□□ -0.82
CCL3-205ENST00000613928 KANSL3Q9P2N6 904 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 CTNNA3Q9UI47 895 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 DENND2AQ9ULE3 1009 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 LEMD3Q9Y2U8 911 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 ANKRD31Q8N7Z5 1873 aa9.93□□□□□ -0.82
CCL3-205ENST00000613928 PCNTO95613 3336 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 HIBADHP31937 336 aaKnown RBP9.92□□□□□ -0.82
CCL3-205ENST00000613928 TGFB2P61812 414 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 CLEC17AQ6ZS10 378 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 Q6ZUG5 572 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms