RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 ANKS1AQ92625 1134 aa20.15■□□□□ 0.82
CCL3-204ENST00000613922 UPF3AQ9H1J1 476 aaKnown RBP20.15■□□□□ 0.82
CCL3-204ENST00000613922 ASTN1O14525 1302 aa20.15■□□□□ 0.82
CCL3-204ENST00000613922 RAD50Q92878 1312 aa20.15■□□□□ 0.82
CCL3-204ENST00000613922 KDM4AO75164 1064 aa20.14■□□□□ 0.81
CCL3-204ENST00000613922 CST5P28325 142 aaPredicted RBP20.14■□□□□ 0.81
CCL3-204ENST00000613922 IQCA1Q86XH1 822 aa20.14■□□□□ 0.81
CCL3-204ENST00000613922 ZKSCAN3Q9BRR0 538 aa20.14■□□□□ 0.81
CCL3-204ENST00000613922 MOXD2PA6NHM9 499 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 B4E1Z4 1266 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 GJA9P57773 515 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 GPATCH4Q5T3I0 446 aaKnown RBP20.13■□□□□ 0.81
CCL3-204ENST00000613922 LRCH3Q96II8 777 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 LBHD1Q9BQE6 289 aaPredicted RBP20.13■□□□□ 0.81
CCL3-204ENST00000613922 PDLIM7Q9NR12 457 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 PRKAG2Q9UGJ0 569 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 PNMA2Q9UL42 364 aa20.13■□□□□ 0.81
CCL3-204ENST00000613922 WDR19Q8NEZ3 1342 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 MYADML2A6NDP7 307 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 ACLYP53396 1101 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 NKX3-2P78367 333 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 KCNA10Q16322 511 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 NSMFQ6X4W1 530 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 MORC4Q8TE76 937 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 ZSWIM5Q9P217 1185 aa20.12■□□□□ 0.81
CCL3-204ENST00000613922 LAMA2P24043 3122 aaKnown RBP20.11■□□□□ 0.81
CCL3-204ENST00000613922 TLE2Q04725 743 aa20.11■□□□□ 0.81
CCL3-204ENST00000613922 GPR153Q6NV75 609 aa20.11■□□□□ 0.81
CCL3-204ENST00000613922 ENAHQ8N8S7 591 aaPredicted RBP20.11■□□□□ 0.81
CCL3-204ENST00000613922 PNMA1Q8ND90 353 aa20.11■□□□□ 0.81
CCL3-204ENST00000613922 CLEC4DQ8WXI8 215 aa20.11■□□□□ 0.81
CCL3-204ENST00000613922 ZSCAN10Q96SZ4 725 aaPredicted RBP20.11■□□□□ 0.81
CCL3-204ENST00000613922 KRT23Q9C075 422 aa20.11■□□□□ 0.81
CCL3-204ENST00000613922 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
CCL3-204ENST00000613922 LOC102724159A0A0B4J2E5 919 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 TRIM43BA6NCK2 446 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 NFIBO00712 420 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 CTAGE5O15320 804 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 CHMLP26374 656 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 IRX5P78411 483 aaPredicted RBP20.1■□□□□ 0.81
CCL3-204ENST00000613922 BAATQ14032 418 aaPredicted RBP20.1■□□□□ 0.81
CCL3-204ENST00000613922 PWP2Q15269 919 aaKnown RBP20.1■□□□□ 0.81
CCL3-204ENST00000613922 SH3RF1Q7Z6J0 888 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 PCSK9Q8NBP7 692 aaKnown RBP20.1■□□□□ 0.81
CCL3-204ENST00000613922 NUP133Q8WUM0 1156 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 TRIM43Q96BQ3 446 aaPredicted RBP20.1■□□□□ 0.81
CCL3-204ENST00000613922 KAT14Q9H8E8 782 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 SPC25Q9HBM1 224 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 STARD7Q9NQZ5 370 aa20.1■□□□□ 0.81
CCL3-204ENST00000613922 GNEQ9Y223 722 aaKnown RBP20.1■□□□□ 0.81
CCL3-204ENST00000613922 TNKSO95271 1327 aa20.09■□□□□ 0.81
CCL3-204ENST00000613922 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.09■□□□□ 0.81
CCL3-204ENST00000613922 C6orf222P0C671 652 aaPredicted RBP20.09■□□□□ 0.81
CCL3-204ENST00000613922 GOLGA8HP0CJ92 632 aa20.09■□□□□ 0.81
CCL3-204ENST00000613922 TAPT1Q6NXT6 567 aa20.09■□□□□ 0.81
CCL3-204ENST00000613922 ANKRD33Q7Z3H0 272 aa20.09■□□□□ 0.81
CCL3-204ENST00000613922 TOX2Q96NM4 488 aa20.09■□□□□ 0.81
CCL3-204ENST00000613922 PURBQ96QR8 312 aaKnown RBP20.09■□□□□ 0.81
CCL3-204ENST00000613922 PRDM5Q9NQX1 630 aaPredicted RBP20.09■□□□□ 0.81
CCL3-204ENST00000613922 DDX49Q9Y6V7 483 aaKnown RBP20.09■□□□□ 0.81
CCL3-204ENST00000613922 ELP1O95163 1332 aa20.08■□□□□ 0.81
CCL3-204ENST00000613922 ASGR1P07306 291 aa20.08■□□□□ 0.81
CCL3-204ENST00000613922 CLTBP09497 229 aa20.08■□□□□ 0.81
CCL3-204ENST00000613922 ALDH5A1P51649 535 aaPredicted RBP20.08■□□□□ 0.81
CCL3-204ENST00000613922 TNFAIP2Q03169 654 aa20.08■□□□□ 0.81
CCL3-204ENST00000613922 UBA5Q9GZZ9 404 aa20.08■□□□□ 0.81
CCL3-204ENST00000613922 VTA1Q9NP79 307 aa20.08■□□□□ 0.81
CCL3-204ENST00000613922 ADD3Q9UEY8 706 aaKnown RBP20.08■□□□□ 0.81
CCL3-204ENST00000613922 KIAA0355O15063 1070 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 PTH1RQ03431 593 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 ASPRV1Q53RT3 343 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 GNASQ5JWF2 1037 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 IQSEC1Q6DN90 963 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 SLC30A10Q6XR72 485 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 FBXO16Q8IX29 292 aaPredicted RBP20.07■□□□□ 0.8
CCL3-204ENST00000613922 BADQ92934 168 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 GLT1D1Q96MS3 346 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 CPVLQ9H3G5 476 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 PDGFCQ9NRA1 345 aa20.07■□□□□ 0.8
CCL3-204ENST00000613922 PTPDC1A2A3K4 754 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 PQBP1O60828 265 aaKnown RBP20.06■□□□□ 0.8
CCL3-204ENST00000613922 SMPD1P17405 629 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 CDK7P50613 346 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 SEC23AQ15436 765 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 RNF207Q6ZRF8 634 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 UBAC1Q9BSL1 405 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 Q9Y3F1 56 aa20.06■□□□□ 0.8
CCL3-204ENST00000613922 BAZ2BQ9UIF8 2168 aaKnown RBP20.05■□□□□ 0.8
CCL3-204ENST00000613922 SGSM2O43147 1006 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 CYP21A2P08686 494 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 ITGB8P26012 769 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 RPS6P62753 249 aaKnown RBP20.05■□□□□ 0.8
CCL3-204ENST00000613922 FAAP100Q0VG06 881 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 CDC37Q16543 378 aaPredicted RBP20.05■□□□□ 0.8
CCL3-204ENST00000613922 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 EEPD1Q7L9B9 569 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 TLK2Q86UE8 772 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 ADGRF4Q8IZF3 695 aa20.05■□□□□ 0.8
CCL3-204ENST00000613922 RGS22Q8NE09 1264 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms