RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DNAJC5GQ8N7S2 189 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 C8orf76Q96K31 380 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 CFHR5Q9BXR6 569 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
CD48-203ENST00000613788 TRPA1O75762 1119 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 BCRP11274 1271 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 CCAR1Q8IX12 1150 aaKnown RBP16.92■□□□□ 0.3
CD48-203ENST00000613788 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 SHCBP1Q8NEM2 672 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 TRERF1Q96PN7 1200 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 BEGAINQ9BUH8 593 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 MOV10L1Q9BXT6 1211 aaKnown RBP16.92■□□□□ 0.3
CD48-203ENST00000613788 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
CD48-203ENST00000613788 SMCO2A6NFE2 343 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 GNA11P29992 359 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 NLRP5P59047 1200 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 NCAPG2Q86XI2 1143 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 MCF2L2Q86YR7 1114 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 MAF1Q9H063 256 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 MROH8Q9H579 483 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 C6orf50Q9HD87 102 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 RNF146Q9NTX7 359 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 RIPK3Q9Y572 518 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 ESYT2A0FGR8 921 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 H3BQV1 296 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 PEX10O60683 326 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 CALML3P27482 149 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
CD48-203ENST00000613788 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 GALNT17Q6IS24 598 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 SAMD3Q8N6K7 520 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 ZMYND12Q9H0C1 365 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 ACAD9Q9H845 621 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 HOMER2Q9NSB8 354 aa16.91■□□□□ 0.3
CD48-203ENST00000613788 THSD7BQ9C0I4 1608 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 ERCC3P19447 782 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 SAFBQ15424 915 aaKnown RBP eCLIP16.9■□□□□ 0.3
CD48-203ENST00000613788 KRT40Q6A162 431 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 TYW1BQ6NUM6 668 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 BICD2Q8TD16 824 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 CUL5Q93034 780 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
CD48-203ENST00000613788 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
CD48-203ENST00000613788 SYT1P21579 422 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 MAPK4P31152 587 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 ADCY7P51828 1080 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 FOSBP53539 338 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 MUM1L1Q5H9M0 696 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 RIC8AQ9NPQ8 531 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 GJB4Q9NTQ9 266 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 KCNJ14Q9UNX9 436 aa16.89■□□□□ 0.29
CD48-203ENST00000613788 MMP1P03956 469 aa16.88■□□□□ 0.29
CD48-203ENST00000613788 TAL1P17542 331 aaPredicted RBP16.88■□□□□ 0.29
CD48-203ENST00000613788 GUCY1B3Q02153 619 aa16.88■□□□□ 0.29
CD48-203ENST00000613788 WDR78Q5VTH9 848 aa16.88■□□□□ 0.29
CD48-203ENST00000613788 PORCNQ9H237 461 aa16.88■□□□□ 0.29
CD48-203ENST00000613788 R3HDMLQ9H3Y0 253 aa16.88■□□□□ 0.29
CD48-203ENST00000613788 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
CD48-203ENST00000613788 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
CD48-203ENST00000613788 MYH6P13533 1939 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
CD48-203ENST00000613788 NFIBO00712 420 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 STX6O43752 255 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 STRNO43815 780 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 CFBP00751 764 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 MCTP2Q6DN12 878 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 NSMFQ6X4W1 530 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 BLIDQ8IZY5 108 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 ANKRD35Q8N283 1001 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 SHISA4Q96DD7 197 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 IVNS1ABPQ9Y6Y0 642 aa16.87■□□□□ 0.29
CD48-203ENST00000613788 PIK3CDO00329 1044 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 OPLAHO14841 1288 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 FCER1AP12319 257 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 KRT2P35908 639 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 SP3Q02447 781 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 GHRHRQ02643 423 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 KCTD2Q14681 263 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
CD48-203ENST00000613788 WBP1LQ9NX94 342 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 PFASO15067 1338 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
CD48-203ENST00000613788 GNL2Q13823 731 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms