RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PFASO15067 1338 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 CASP8AP2Q9UKL3 1982 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 CYTH3O43739 400 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 ADCY3O60266 1144 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 ST18O60284 1047 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 XRCC5P13010 732 aaKnown RBP15.35■□□□□ 0.05
MDC1-209ENST00000613547 CDC27P30260 824 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
MDC1-209ENST00000613547 MCF2L2Q86YR7 1114 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
MDC1-209ENST00000613547 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 KIF2CQ99661 725 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 MAF1Q9H063 256 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 RBM27Q9P2N5 1060 aaKnown RBP15.35■□□□□ 0.05
MDC1-209ENST00000613547 PCDHA1Q9Y5I3 950 aa15.35■□□□□ 0.05
MDC1-209ENST00000613547 HOXC6P09630 235 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 CYP2B6P20813 491 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 GRK4P32298 578 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 ADD1P35611 737 aaKnown RBP15.34■□□□□ 0.05
MDC1-209ENST00000613547 CCT2P78371 535 aaKnown RBP15.34■□□□□ 0.05
MDC1-209ENST00000613547 AKAP17AQ02040 695 aaKnown RBP15.34■□□□□ 0.05
MDC1-209ENST00000613547 STK3Q13188 491 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 SLC35G1Q2M3R5 365 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 SLC9C1Q4G0N8 1177 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 NSMFQ6X4W1 530 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 NOL8Q76FK4 1167 aaKnown RBP15.34■□□□□ 0.05
MDC1-209ENST00000613547 PXYLP1Q8TE99 480 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 USP6NLQ92738 828 aa15.34■□□□□ 0.05
MDC1-209ENST00000613547 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
MDC1-209ENST00000613547 POTEB2H3BUK9 544 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 CDKL5O76039 1030 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 MUM1L1Q5H9M0 696 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 TRIM22Q8IYM9 498 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 TNS4Q8IZW8 715 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 A1CFQ9NQ94 594 aaKnown RBP15.33■□□□□ 0.04
MDC1-209ENST00000613547 FAM217BQ9NTX9 383 aaPredicted RBP15.33■□□□□ 0.04
MDC1-209ENST00000613547 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
MDC1-209ENST00000613547 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 LIMCH1Q9UPQ0 1083 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 CNTNAP5Q8WYK1 1306 aa15.33■□□□□ 0.04
MDC1-209ENST00000613547 PTPDC1A2A3K4 754 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 hCG_1984214I3L0E3 225 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 NFIBO00712 420 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 PFKFB2O60825 505 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 PGK2P07205 417 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 IFNAR1P17181 557 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 RNF207Q6ZRF8 634 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 ZNF713Q8N859 430 aaPredicted RBP15.32■□□□□ 0.04
MDC1-209ENST00000613547 RGS22Q8NE09 1264 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 CLEC4DQ8WXI8 215 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
MDC1-209ENST00000613547 CYP39A1Q9NYL5 469 aa15.32■□□□□ 0.04
MDC1-209ENST00000613547 DIS3Q9Y2L1 958 aaKnown RBP15.32■□□□□ 0.04
MDC1-209ENST00000613547 V9GY48 417 aaPredicted RBP15.32■□□□□ 0.04
MDC1-209ENST00000613547 hCG_1642624A0A1W2PR95 340 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 COBLO75128 1261 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 HMGCRP04035 888 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 ELNP15502 786 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 TAL1P17542 331 aaPredicted RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 UBXN2AP68543 259 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 FUT2Q10981 343 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 MFSD14CQ5VZR4 134 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 HEATR3Q7Z4Q2 680 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 SAMD3Q8N6K7 520 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 ZSCAN31Q96LW9 406 aaPredicted RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 RNF26Q9BY78 433 aaPredicted RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 MAP3K20Q9NYL2 800 aaKnown RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 ADD3Q9UEY8 706 aaKnown RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 ZSWIM8A7E2V4 1837 aa15.31■□□□□ 0.04
MDC1-209ENST00000613547 COL11A1P12107 1806 aaPredicted RBP15.31■□□□□ 0.04
MDC1-209ENST00000613547 DNAJC25-GNG10A0A024R161 153 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 PRPF3O43395 683 aaKnown RBP15.3■□□□□ 0.04
MDC1-209ENST00000613547 CALML3P27482 149 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 MCM2P49736 904 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 SSRP1Q08945 709 aaKnown RBP15.3■□□□□ 0.04
MDC1-209ENST00000613547 SCRN1Q12765 414 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 PPP1R18Q6NYC8 613 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 SH3TC2Q8TF17 1288 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 TRIB2Q92519 343 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 MAML3Q96JK9 1138 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 MPHOSPH6Q99547 160 aaKnown RBP15.3■□□□□ 0.04
MDC1-209ENST00000613547 SLC26A6Q9BXS9 759 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
MDC1-209ENST00000613547 ZNF236Q9UL36 1845 aa15.3■□□□□ 0.04
MDC1-209ENST00000613547 CFBP00751 764 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
MDC1-209ENST00000613547 NTRK3Q16288 839 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 CCL14Q16627 93 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 ME3Q16798 604 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
MDC1-209ENST00000613547 MSL3Q8N5Y2 521 aaKnown RBP15.29■□□□□ 0.04
MDC1-209ENST00000613547 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 CCDC12Q8WUD4 166 aaPredicted RBP15.29■□□□□ 0.04
MDC1-209ENST00000613547 CUL5Q93034 780 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 PHKBQ93100 1093 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 GTF3C6Q969F1 213 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms