RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 GPR153Q6NV75 609 aa20.38■□□□□ 0.85
PRKN-209ENST00000612485 PCSK9Q8NBP7 692 aaKnown RBP20.38■□□□□ 0.85
PRKN-209ENST00000612485 ZKSCAN3Q9BRR0 538 aa20.38■□□□□ 0.85
PRKN-209ENST00000612485 KATNBL1Q9H079 304 aa20.38■□□□□ 0.85
PRKN-209ENST00000612485 STARD7Q9NQZ5 370 aa20.38■□□□□ 0.85
PRKN-209ENST00000612485 PDLIM7Q9NR12 457 aa20.38■□□□□ 0.85
PRKN-209ENST00000612485 LAMA4Q16363 1823 aa20.38■□□□□ 0.85
PRKN-209ENST00000612485 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
PRKN-209ENST00000612485 GJA9P57773 515 aa20.37■□□□□ 0.85
PRKN-209ENST00000612485 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
PRKN-209ENST00000612485 KCNA10Q16322 511 aa20.37■□□□□ 0.85
PRKN-209ENST00000612485 GPATCH4Q5T3I0 446 aaKnown RBP20.37■□□□□ 0.85
PRKN-209ENST00000612485 KRT23Q9C075 422 aa20.37■□□□□ 0.85
PRKN-209ENST00000612485 UPF3AQ9H1J1 476 aaKnown RBP20.37■□□□□ 0.85
PRKN-209ENST00000612485 RAD50Q92878 1312 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 MCM3APO60318 1980 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 B4E1Z4 1266 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 ADCY6O43306 1168 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 GSPT1P15170 499 aaKnown RBP20.36■□□□□ 0.85
PRKN-209ENST00000612485 CCSAPQ6IQ19 270 aaPredicted RBP20.36■□□□□ 0.85
PRKN-209ENST00000612485 GLT1D1Q96MS3 346 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 CNNM2Q9H8M5 875 aa20.36■□□□□ 0.85
PRKN-209ENST00000612485 ADD3Q9UEY8 706 aaKnown RBP20.36■□□□□ 0.85
PRKN-209ENST00000612485 MYADML2A6NDP7 307 aa20.35■□□□□ 0.85
PRKN-209ENST00000612485 PQBP1O60828 265 aaKnown RBP20.35■□□□□ 0.85
PRKN-209ENST00000612485 CLTBP09497 229 aa20.35■□□□□ 0.85
PRKN-209ENST00000612485 TNFAIP2Q03169 654 aa20.35■□□□□ 0.85
PRKN-209ENST00000612485 BAATQ14032 418 aaPredicted RBP20.35■□□□□ 0.85
PRKN-209ENST00000612485 NOL8Q76FK4 1167 aaKnown RBP20.35■□□□□ 0.85
PRKN-209ENST00000612485 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
PRKN-209ENST00000612485 RUFY2Q8WXA3 655 aa20.35■□□□□ 0.85
PRKN-209ENST00000612485 ANKS1AQ92625 1134 aa20.35■□□□□ 0.85
PRKN-209ENST00000612485 ZSCAN10Q96SZ4 725 aaPredicted RBP20.35■□□□□ 0.85
PRKN-209ENST00000612485 ASTN1O14525 1302 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 ELP1O95163 1332 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 WDR19Q8NEZ3 1342 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 LOC102724159A0A0B4J2E5 919 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 TRIM43BA6NCK2 446 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 ASGR1P07306 291 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 PWP2Q15269 919 aaKnown RBP20.34■□□□□ 0.85
PRKN-209ENST00000612485 GNASQ5JWF2 1037 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 SH3RF1Q7Z6J0 888 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 BADQ92934 168 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 TRIM43Q96BQ3 446 aaPredicted RBP20.34■□□□□ 0.85
PRKN-209ENST00000612485 TOX2Q96NM4 488 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 ZSWIM5Q9P217 1185 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 LTBP2Q14767 1821 aa20.34■□□□□ 0.85
PRKN-209ENST00000612485 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.33■□□□□ 0.85
PRKN-209ENST00000612485 PTPDC1A2A3K4 754 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 DCDC2CA8MYV0 355 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 NFIBO00712 420 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 GOLGA8HP0CJ92 632 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 NKX3-2P78367 333 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 IQSEC1Q6DN90 963 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 ANKRD33Q7Z3H0 272 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 MORC4Q8TE76 937 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 UBAC1Q9BSL1 405 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 IL25Q9H293 177 aa20.33■□□□□ 0.85
PRKN-209ENST00000612485 TNKSO95271 1327 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 MROH7Q68CQ1 1323 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 KIAA0355O15063 1070 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 ALDH5A1P51649 535 aaPredicted RBP20.32■□□□□ 0.84
PRKN-209ENST00000612485 ASPRV1Q53RT3 343 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 RNF207Q6ZRF8 634 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 TLK2Q86UE8 772 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 FBXO16Q8IX29 292 aaPredicted RBP20.32■□□□□ 0.84
PRKN-209ENST00000612485 ENAHQ8N8S7 591 aaPredicted RBP20.32■□□□□ 0.84
PRKN-209ENST00000612485 CLEC4DQ8WXI8 215 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 AP5M1Q9H0R1 490 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 TMEM39AQ9NV64 488 aa20.32■□□□□ 0.84
PRKN-209ENST00000612485 GNEQ9Y223 722 aaKnown RBP20.32■□□□□ 0.84
PRKN-209ENST00000612485 A0A0U1RQG5 324 aaPredicted RBP20.31■□□□□ 0.84
PRKN-209ENST00000612485 RAG1P15918 1043 aa20.31■□□□□ 0.84
PRKN-209ENST00000612485 CALML3P27482 149 aa20.31■□□□□ 0.84
PRKN-209ENST00000612485 IRX5P78411 483 aaPredicted RBP20.31■□□□□ 0.84
PRKN-209ENST00000612485 TAPT1Q6NXT6 567 aa20.31■□□□□ 0.84
PRKN-209ENST00000612485 EEPD1Q7L9B9 569 aa20.31■□□□□ 0.84
PRKN-209ENST00000612485 PURBQ96QR8 312 aaKnown RBP20.31■□□□□ 0.84
PRKN-209ENST00000612485 MPHOSPH6Q99547 160 aaKnown RBP20.31■□□□□ 0.84
PRKN-209ENST00000612485 UBA5Q9GZZ9 404 aa20.31■□□□□ 0.84
PRKN-209ENST00000612485 Q9Y3F1 56 aa20.31■□□□□ 0.84
PRKN-209ENST00000612485 CTAGE5O15320 804 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 ZEB2O60315 1214 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 SMPD1P17405 629 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 CHMLP26374 656 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 FAAP100Q0VG06 881 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 TRDNQ13061 729 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 IFIT1BQ5T764 474 aaKnown RBP20.3■□□□□ 0.84
PRKN-209ENST00000612485 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 PDGFCQ9NRA1 345 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 DDX49Q9Y6V7 483 aaKnown RBP20.3■□□□□ 0.84
PRKN-209ENST00000612485 LRRC37A2A6NM11 1700 aa20.3■□□□□ 0.84
PRKN-209ENST00000612485 ARVCFO00192 962 aa20.29■□□□□ 0.84
PRKN-209ENST00000612485 DYNC1LI2O43237 492 aaPredicted RBP20.29■□□□□ 0.84
PRKN-209ENST00000612485 CABYRO75952 493 aa20.29■□□□□ 0.84
PRKN-209ENST00000612485 PARP1P09874 1014 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms