RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CLCN6P51797 869 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 STX17P56962 302 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 GNG11P61952 73 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
CDH1-213ENST00000612417 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
CDH1-213ENST00000612417 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 MTRQ99707 1265 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 SWAP70Q9UH65 585 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
CDH1-213ENST00000612417 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
CDH1-213ENST00000612417 CD2APQ9Y5K6 639 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 COL4A5P29400 1685 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 M0R2N6 131 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 MFAP3LO75121 409 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
CDH1-213ENST00000612417 MCM7P33993 719 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 GABPAQ06546 454 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 SPAG1Q07617 926 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 RBL2Q08999 1139 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 GRM4Q14833 912 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 JDP2Q8WYK2 163 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 PRMT6Q96LA8 375 aaPredicted RBP16.56■□□□□ 0.24
CDH1-213ENST00000612417 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 CTNND2Q9UQB3 1225 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 MRFAP1Q9Y605 127 aa16.56■□□□□ 0.24
CDH1-213ENST00000612417 BRCA1P38398 1863 aaKnown RBP16.55■□□□□ 0.24
CDH1-213ENST00000612417 GNAQP50148 359 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 BMS1Q14692 1282 aaKnown RBP16.55■□□□□ 0.24
CDH1-213ENST00000612417 ZNF658Q5TYW1 1059 aaPredicted RBP16.55■□□□□ 0.24
CDH1-213ENST00000612417 CNGA4Q8IV77 575 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 DAGLBQ8NCG7 672 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 CARD6Q9BX69 1037 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 ARGLU1Q9NWB6 273 aaPredicted RBP16.55■□□□□ 0.24
CDH1-213ENST00000612417 FAM198AQ9UFP1 575 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 MPHOSPH10O00566 681 aaKnown RBP16.55■□□□□ 0.24
CDH1-213ENST00000612417 ADAMTS3O15072 1205 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 TXLNAP40222 546 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 GALNT17Q6IS24 598 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 SGIP1Q9BQI5 828 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 DHX36Q9H2U1 1008 aaKnown RBP16.55■□□□□ 0.24
CDH1-213ENST00000612417 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
CDH1-213ENST00000612417 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 SOWAHDA6NJG2 315 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 AKR1B1P15121 316 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 PAK1Q13153 545 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 SEMA3FQ13275 785 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 DLGAP5Q15398 846 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 RASGRP2Q7LDG7 609 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 MRPL44Q9H9J2 332 aaKnown RBP16.54■□□□□ 0.24
CDH1-213ENST00000612417 TMOD2Q9NZR1 351 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
CDH1-213ENST00000612417 ZRANB2O95218 330 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDH1-213ENST00000612417 KIF20AO95235 890 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 GYPCP04921 128 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 MTF1Q14872 753 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 KRT31Q15323 416 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 RAD9BQ6WBX8 426 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 STAMQ92783 540 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 BLZF1Q9H2G9 400 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 PI4KBQ9UBF8 816 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
CDH1-213ENST00000612417 RPN1P04843 607 aaKnown RBP16.53■□□□□ 0.24
CDH1-213ENST00000612417 SHMT1P34896 483 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 PTGER2P43116 358 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 TRIM14Q14142 442 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 STAG2Q8N3U4 1231 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 CCDC148Q8NFR7 591 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 GMLQ99445 158 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 DISC1Q9NRI5 854 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 FHOD1Q9Y613 1164 aa16.53■□□□□ 0.24
CDH1-213ENST00000612417 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
CDH1-213ENST00000612417 MYL1P05976 194 aa16.52■□□□□ 0.24
CDH1-213ENST00000612417 SLURP2P0DP57 97 aa16.52■□□□□ 0.24
CDH1-213ENST00000612417 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
CDH1-213ENST00000612417 CXCL9Q07325 125 aa16.52■□□□□ 0.24
CDH1-213ENST00000612417 RSRC2Q7L4I2 434 aaKnown RBP16.52■□□□□ 0.24
CDH1-213ENST00000612417 EHD4Q9H223 541 aa16.52■□□□□ 0.24
CDH1-213ENST00000612417 CLRN2A0PK11 232 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 LAD1O00515 517 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.23
CDH1-213ENST00000612417 SPDYE6P0CI01 402 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 GOLGA8HP0CJ92 632 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 CASP14P31944 242 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 ATP2B2Q01814 1243 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 PPP2R3AQ06190 1150 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 TCP11X2Q5H9J9 407 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 TYW1BQ6NUM6 668 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 GPR161Q8N6U8 529 aaKnown RBP16.52■□□□□ 0.23
CDH1-213ENST00000612417 AGBL3Q8NEM8 1001 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms